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contig_metadata

28 rows where analysis = "blastn", bioproject = "PRJNA330616" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 28 ✖

tax_clade 1

bioproject 1

  • PRJNA330616 · 28 ✖

analysis 1

  • blastn · 28 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1664375 1664375 PRJNA330616_P_NODE_22962_length_176_cov_2.007874_g22553_i0 PRJNA330616 22962 176 2.007874 3.53385824 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 281 1.74e-71   NTclustered gi|347439268|gb|JN111981.1| 151077 g22553 i0 95.48 15.8693181818182 177 7 100 1 1 176 312 136 Chilodonella uncinata strain ATCC 50194 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 2793 281 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
1664455 1664455 PRJNA330616_P_NODE_29222_length_164_cov_0.886957_g28813_i0 PRJNA330616 29222 164 0.886957 1.45460948 Tetrahymena pigmentosa 5907 SAR_Eukaryotes SAR_Eukaryotes 215 1.65e-51   NTclustered gi|114329902|ref|NC_008339.1| 5907 g28813 i0 91.139 4.84146341463415 158 14 96 0 7 164 31261 31104 Tetrahymena pigmentosa mitochondrion, complete genome blastn 794 215 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pigmentosa
3620152 3620152 PRJNA330616_P_NODE_4903_length_382_cov_20.354354_g4494_i0 PRJNA330616 4903 382 20.354354 77.75363228 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 278 5.52e-70   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g4494 i0 98.113 2.07853403141361 159 3 42 0 224 382 3082 2924 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 794 278 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
5493132 5493132 PRJNA330616_P_NODE_16965_length_203_cov_2.649351_g16556_i0 PRJNA330616 16965 203 2.649351 5.37818253 Vorticella sp. 4 JG-2011 1295638 SAR_Eukaryotes SAR_Eukaryotes 276 9.64e-70   NTclustered gi|512134943|gb|JX178902.1| 1295638 g16556 i0 91.919 38.320197044335 198 15 98 1 6 203 1625 1429 Vorticella sp. 4 JG-2011 clone 2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 7779 276 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 4 JG-2011
5493218 5493218 PRJNA330616_P_NODE_21945_length_180_cov_2.931298_g21536_i0 PRJNA330616 21945 180 2.931298 5.2763364 Tetrahymena furgasoni 5898 SAR_Eukaryotes SAR_Eukaryotes 327 2.2699999999999996e-85   NTclustered gi|1268580094|gb|KY218574.1| 5898 g21536 i0 99.444 84.2944444444445 180 1 100 0 1 180 183 4 Tetrahymena furgasoni isolate 20749-1 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 15173 327 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena furgasoni
6172121 6172121 PRJNA330616_P_NODE_1065_length_915_cov_33.517321_g760_i0 PRJNA330616 1065 915 33.517321 306.68348715 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 1474 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g760 i0 95.742 64.5420765027322 916 37 100 2 1 915 923 9 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 59056 1474 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
6767302 6767302 PRJNA330616_P_NODE_23326_length_175_cov_1.349206_g22917_i0 PRJNA330616 23326 175 1.349206 2.3611105 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 263 6.26e-66   NTclustered gi|110645063|gb|DQ665311.1| 151077 g22917 i0 93.714 64.9314285714286 175 11 100 0 1 175 453 279 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 11363 263 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
6767461 6767461 PRJNA330616_P_NODE_4026_length_427_cov_1.997354_g3618_i0 PRJNA330616 4026 427 1.997354 8.52870158 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 610 5.419999999999999e-170   NTclustered gi|301014695|gb|GQ377692.1| 151077 g3618 i0 93.447 60.0655737704918 412 26 96 1 16 427 469 59 Chilodonella uncinata ribosomal protein S23a-like (rps23a) mRNA, complete sequence blastn 25648 610 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
7447358 7447358 PRJNA330616_P_NODE_5966_length_343_cov_2.326531_g5557_i0 PRJNA330616 5966 343 2.326531 7.98000133 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 623 5.479999999999999e-174   NTclustered gi|1621572405|gb|MH051920.1| 5893 g5557 i0 99.417 99.9795918367347 343 2 100 0 1 343 377 35 Tetrahymena borealis strain 1630/5A small subunit ribosomal RNA gene, partial sequence blastn 34293 628 0.99203821656051006 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena borealis
8722039 8722039 PRJNA330616_P_NODE_5667_length_352_cov_8.452145_g5258_i0 PRJNA330616 5667 352 8.452145 29.7515504 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 634 2.5999999999999988e-177   NTclustered gi|2223186636|gb|MW310239.1| 151077 g5258 i0 99.148 94.2556818181818 352 3 100 0 1 352 363 12 Chilodonella uncinata isolate 20200709 small subunit ribosomal RNA gene, partial sequence blastn 33178 640 0.990625 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
9317668 9317668 PRJNA330616_P_NODE_21128_length_184_cov_1.311111_g20719_i0 PRJNA330616 21128 184 1.311111 2.41244424 Tetrahymena furgasoni 5898 SAR_Eukaryotes SAR_Eukaryotes 335 1.3899999999999996e-87   NTclustered gi|1268580055|gb|KY218535.1| 5898 g20719 i0 99.457 35.5380434782609 184 1 100 0 1 184 72 255 Tetrahymena furgasoni isolate 20749-1 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 6539 335 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena furgasoni
9317680 9317680 PRJNA330616_P_NODE_21988_length_180_cov_1.557252_g21579_i0 PRJNA330616 21988 180 1.557252 2.8030536 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 255 1.08e-63   NTclustered gi|347439271|gb|JN111984.1| 151077 g21579 i0 92.222 94.8166666666667 180 14 100 0 1 180 116 295 Chilodonella uncinata strain USA_SC2 clone SP1 beta tubulin (btub) gene, partial cds; macronuclear blastn 17067 255 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
10593348 10593348 PRJNA330616_P_NODE_2009_length_637_cov_4.119048_g1623_i0 PRJNA330616 2009 637 4.119048 26.23833576 Tetrahymena chironomi 3034767 SAR_Eukaryotes SAR_Eukaryotes 1133 0   NTclustered gi|2459327221|gb|OQ626840.1| 3034767 g1623 i0 98.744 71.2354788069074 637 8 100 0 1 637 482 1118 Tetrahymena chironomi isolate LLH20220320 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 45377 1133 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena chironomi
11868199 11868199 PRJNA330616_P_NODE_15590_length_212_cov_0.938650_g15181_i0 PRJNA330616 15590 212 0.93865 1.989938 Sterkiella histriomuscorum 94289 SAR_Eukaryotes SAR_Eukaryotes 91.6 3.95e-14   NTclustered gi|47176525|gb|AY618105.1| 94289 g15181 i0 80.159 1.24528301886792 126 22 58 3 71 194 587 463 Sterkiella histriomuscorum clone UGC1O0005_E09_R genomic sequence blastn 264 91.6 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Sterkiella Sterkiella histriomuscorum
11868324 11868324 PRJNA330616_P_NODE_24110_length_172_cov_1.609756_g23701_i0 PRJNA330616 24110 172 1.609756 2.76878032 Frontonia apoacuminata 2787047 SAR_Eukaryotes SAR_Eukaryotes 121 3.9e-23   NTclustered gi|2725930538|gb|OQ970013.1| 2787047 g23701 i0 82.734 77.1976744186046 139 20 80 4 36 172 768 632 Frontonia apoacuminata isolate S237.12 cytochrome oxidase subunit I (COI) gene, partial cds; mitochondrial blastn 13278 121 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Frontoniidae Frontonia Frontonia apoacuminata
11868465 11868465 PRJNA330616_P_NODE_3270_length_479_cov_1.748837_g2864_i0 PRJNA330616 3270 479 1.748837 8.37692923 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 758 0   NTclustered gi|110645063|gb|DQ665311.1| 151077 g2864 i0 95.208 24.7098121085595 480 21 100 2 1 479 948 470 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 11836 758 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
13822917 13822917 PRJNA330616_P_NODE_6051_length_340_cov_4.116838_g5642_i0 PRJNA330616 6051 340 4.116838 13.9972492 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 617 2.5299999999999994e-172   NTclustered gi|10782|emb|X54004.1| 5908 g5642 i0 99.412 85.0911764705882 340 2 100 0 1 340 1601 1940 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 28931 617 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
13822937 13822937 PRJNA330616_P_NODE_7371_length_306_cov_3.241245_g6962_i0 PRJNA330616 7371 306 3.241245 9.9182097 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 566 8.239999999999998e-157   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g6962 i0 100 95.3169934640523 306 0 100 0 1 306 959 1264 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 29167 566 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
15097158 15097158 PRJNA330616_P_NODE_19412_length_191_cov_1.436620_g19003_i0 PRJNA330616 19412 191 1.43662 2.7439442 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 331 1.88e-86   NTclustered gi|15027629|ref|NC_003029.1| 5911 g19003 i0 97.906 61.9424083769633 191 4 100 0 1 191 1260 1450 Tetrahymena thermophila mitochondrion, complete genome blastn 11831 331 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
15692431 15692431 PRJNA330616_P_NODE_28493_length_164_cov_1.739130_g28084_i0 PRJNA330616 28493 164 1.73913 2.8521732 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 281 1.6000000000000001e-71   NTclustered gi|110645063|gb|DQ665311.1| 151077 g28084 i0 97.561 1 164 4 100 0 1 164 1193 1030 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 164 281 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
16967271 16967271 PRJNA330616_P_NODE_9614_length_267_cov_36.532110_g9205_i0 PRJNA330616 9614 267 36.53211 97.5407337 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 494 3.38e-135   NTclustered gi|158147318|gb|EU047813.1| 151077 g9205 i0 100 60.7003745318352 267 0 100 0 1 267 321 55 Chilodonella uncinata strain ATCC 50194 5.8S ribosomal RNA gene and internal transcribed spacer 2, partial sequence; macronuclear blastn 16207 494 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
18241302 18241302 PRJNA330616_P_NODE_22195_length_179_cov_1.961538_g21786_i0 PRJNA330616 22195 179 1.961538 3.51115302 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 158 3.12e-34   NTclustered gi|110645063|gb|DQ665311.1| 151077 g21786 i0 95.876 14.4022346368715 97 4 54 0 83 179 1205 1109 Chilodonella uncinata clone 1 elongation factor 1-alpha (EF-1alpha) gene, partial cds; macronuclear blastn 2578 158 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
19515581 19515581 PRJNA330616_P_NODE_24596_length_170_cov_1.685950_g24187_i0 PRJNA330616 24596 170 1.68595 2.866115 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 150 4.9e-32   NTclustered gi|829188477|ref|XM_001023087.3| 312017 g24187 i0 84.177 24.3941176470588 158 21 92 4 15 170 1050 895 Tetrahymena thermophila SB210 S-adenosyl-L-homocysteine hydrolase partial mRNA blastn 4147 150 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
20791168 20791168 PRJNA330616_P_NODE_23177_length_175_cov_2.801587_g22768_i0 PRJNA330616 23177 175 2.801587 4.90277725 uncultured ciliate 187299 SAR_Eukaryotes SAR_Eukaryotes 267 4.84e-67   NTclustered gi|221185865|gb|FJ577812.1| 187299 g22768 i0 94.286 64.9371428571429 175 9 100 1 1 175 519 692 Uncultured ciliate clone Ivry08 18S ribosomal RNA gene, partial sequence blastn 11364 267 1 Eukaryota Sar   Ciliophora         uncultured ciliate
20791279 20791279 PRJNA330616_P_NODE_3177_length_488_cov_2.813212_g2772_i0 PRJNA330616 3177 488 2.813212 13.72847456 Isotricha prostoma 5987 SAR_Eukaryotes SAR_Eukaryotes 420 1.1299999999999998e-112   NTclustered gi|92790155|emb|AJ965263.1| 5987 g2772 i0 86.898 195.305327868852 374 49 77 0 2 375 490 863 Isotricha prostoma partial mRNA for Polyubiqutin 1 (polyubiqutin 1 gene) blastn 95309 420 1 Eukaryota Sar   Ciliophora Litostomatea Vestibuliferida Isotrichidae Isotricha Isotricha prostoma
20791294 20791294 PRJNA330616_P_NODE_33037_length_153_cov_2.942308_g32628_i0 PRJNA330616 33037 153 2.942308 4.50173124 Moneuplotes crassus 5936 SAR_Eukaryotes SAR_Eukaryotes 67.6 4.48e-7   NTclustered gi|74039739|gb|DQ114948.1| 5936 g32628 i0 83.117 5.30065359477124 77 9 49 4 79 153 244 170 Moneuplotes crassus clone pEC1 U2 snRNA gene, complete sequence; macronuclear blastn 811 67.6 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Moneuplotes Moneuplotes crassus
23341775 23341775 PRJNA330616_P_NODE_579_length_1286_cov_5.232013_g361_i0 PRJNA330616 579 1286 5.232013 67.28368718 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 1125 0   NTclustered gi|1389870231|gb|MH356268.1| 1654720 g361 i0 88.735 19.6034214618974 941 78 72 21 1 926 928 1 Chilodonella piscicola strain PR small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 25210 1125 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
23341800 23341800 PRJNA330616_P_NODE_7759_length_299_cov_1.124000_g7350_i0 PRJNA330616 7759 299 1.124 3.36076 Uronema marinum 35107 SAR_Eukaryotes SAR_Eukaryotes 207 5.61e-49   NTclustered gi|1464314795|ref|NC_039174.1| 35107 g7350 i0 80.586 90.056856187291 273 49 91 4 28 298 17044 16774 Uronema marinum mitochondrion, complete genome blastn 26927 207 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Uronematidae Uronema Uronema marinum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;