contig_metadata
8 rows where analysis = "blastn", bioproject = "PRJNA330616" and tax_phylum = "Acidobacteriota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1069366 | 1069366 | PRJNA330616_P_NODE_23321_length_175_cov_1.365079_g22912_i0 | PRJNA330616 | 23321 | 175 | 1.365079 | 2.38888825 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 122 | 1.1099999999999999e-23 | NTclustered | gi|2621701418|emb|OY760136.1| | 2910147 | g22912 | i0 | 79.885 | 27.6971428571429 | 174 | 29 | 98 | 6 | 1 | 171 | 1699524 | 1699354 | MAG: Vicinamibacterales bacterium isolate f9e760c9-8bbe-4e76-9a0a-40d6f1fb97b8 genome assembly, chromosome: 1 | blastn | 4847 | 122 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacterales bacterium | ||||
| 1664537 | 1664537 | PRJNA330616_P_NODE_5542_length_357_cov_1.902597_g5133_i0 | PRJNA330616 | 5542 | 357 | 1.902597 | 6.79227129 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 462 | 1.32e-125 | NTclustered | gi|1958085512|gb|CP065000.1| | 1978231 | g5133 | i0 | 90.028 | 107.137254901961 | 361 | 31 | 100 | 4 | 1 | 357 | 3300016 | 3299657 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome | blastn | 38248 | 462 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 2940347 | 2940347 | PRJNA330616_P_NODE_23723_length_173_cov_2.411290_g23314_i0 | PRJNA330616 | 23723 | 173 | 2.41129 | 4.1715317 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 222 | 1.05e-53 | NTclustered | gi|1958085512|gb|CP065000.1| | 1978231 | g23314 | i0 | 90.173 | 90.757225433526 | 173 | 14 | 100 | 3 | 1 | 173 | 3298705 | 3298874 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.078_cln chromosome, complete genome | blastn | 15701 | 222 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 11868438 | 11868438 | PRJNA330616_P_NODE_30690_length_162_cov_1.398230_g30281_i0 | PRJNA330616 | 30690 | 162 | 1.39823 | 2.2651326 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 215 | 1.62e-51 | NTclustered | gi|1958093598|gb|CP065003.1| | 1978231 | g30281 | i0 | 92.667 | 67.3641975308642 | 150 | 10 | 92 | 1 | 1 | 149 | 317262 | 317411 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.185_cln chromosome, complete genome | blastn | 10913 | 215 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 16967232 | 16967232 | PRJNA330616_P_NODE_7094_length_313_cov_1.488636_g6685_i0 | PRJNA330616 | 7094 | 313 | 1.488636 | 4.65943068 | Vicinamibacterales bacterium | 2910147 | Bacteria | Bacteria | 193 | 1.65e-44 | NTclustered | gi|2621701418|emb|OY760136.1| | 2910147 | g6685 | i0 | 80.224 | 72.6932907348243 | 268 | 43 | 84 | 10 | 50 | 313 | 1699525 | 1699264 | MAG: Vicinamibacterales bacterium isolate f9e760c9-8bbe-4e76-9a0a-40d6f1fb97b8 genome assembly, chromosome: 1 | blastn | 22753 | 193 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacterales bacterium | ||||
| 19515668 | 19515668 | PRJNA330616_P_NODE_31276_length_162_cov_0.902655_g30867_i0 | PRJNA330616 | 31276 | 162 | 0.902655 | 1.4623011 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 147 | 6.009999999999999e-31 | NTclustered | gi|2874253885|emb|OY970060.1| | 171953 | g30867 | i0 | 85.714 | 5.09259259259259 | 140 | 18 | 86 | 2 | 24 | 162 | 2282265 | 2282127 | MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.4 genome assembly, chromosome: 1 | blastn | 825 | 147 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 19515735 | 19515735 | PRJNA330616_P_NODE_6576_length_326_cov_1.018051_g6167_i0 | PRJNA330616 | 6576 | 326 | 1.018051 | 3.31884626 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 357 | 5.8e-94 | NTclustered | gi|217038907|gb|EU810998.1| | 171953 | g6167 | i0 | 93.361 | 220.69018404908 | 241 | 16 | 74 | 0 | 86 | 326 | 1 | 241 | Uncultured Acidobacteria bacterium clone 01QCK 23S ribosomal RNA gene, partial sequence | blastn | 71945 | 357 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 24615599 | 24615599 | PRJNA330616_P_NODE_11220_length_247_cov_1.262626_g10811_i0 | PRJNA330616 | 11220 | 247 | 1.262626 | 3.11868622 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 265 | 2.63e-66 | NTclustered | gi|2874253692|emb|OY969418.1| | 171953 | g10811 | i0 | 86 | 163.514170040486 | 250 | 32 | 100 | 2 | 1 | 247 | 4233619 | 4233868 | MAG: uncultured Acidobacteriota bacterium isolate MFD09212.bin.c.1 genome assembly, chromosome: 1 | blastn | 40388 | 265 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;