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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA326068" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA326068 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1069198 1069198 PRJNA326068_P_NODE_13101_length_249_cov_10.272727_g12138_i0 PRJNA326068 13101 249 10.272727 25.57909023 Fungi 4751 Fungi Fungi 460 3.16e-125   NTclustered gi|1694443677|ref|NG_065498.1| 4841 g12138 i0 100 100.008032128514 249 0 100 0 1 249 114 362 Mucor racemosus NRRL 3640 18S rRNA gene, partial sequence; from TYPE material blastn 24902 460 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
8042725 8042725 PRJNA326068_P_NODE_6167_length_440_cov_17.647202_g5278_i0 PRJNA326068 6167 440 17.647202 77.6476888 Mucor racemosus 4841 Fungi Fungi 787 0   NTclustered gi|1473258363|gb|MH871307.1| 311236 g5278 i0 99.767 95.9477272727273 429 1 98 0 12 440 738 310 Mucor racemosus f. sphaerosporus culture CBS:143.70 strain CBS 143.70 large subunit ribosomal RNA gene, partial sequence blastn 42217 787 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
11868076 11868076 PRJNA326068_P_NODE_7270_length_395_cov_8.344262_g6335_i0 PRJNA326068 7270 395 8.344262 32.9598349 Mucor racemosus 4841 Fungi Fungi 453 8.87e-123   NTclustered gi|225134681|gb|FJ345353.1| 4841 g6335 i0 100 38.0506329113924 245 0 62 0 151 395 3997 3753 Mucor racemosus strain ATCC 42647 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 15030 453 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
16371746 16371746 PRJNA326068_P_NODE_10053_length_315_cov_12.825175_g9094_i0 PRJNA326068 10053 315 12.825175 40.39930125 Mucor 4830 Fungi Fungi 582 8.459999999999998e-162   NTclustered gi|1473254563|gb|MH867507.1| 311236 g9094 i0 100 98.5079365079365 315 0 100 0 1 315 11 325 Mucor racemosus f. sphaerosporus culture CBS:258.39 strain CBS 258.39 large subunit ribosomal RNA gene, partial sequence blastn 31030 582 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
19515279 19515279 PRJNA326068_P_NODE_11296_length_285_cov_20.503906_g10334_i0 PRJNA326068 11296 285 20.503906 58.4361321 Endogone incrassata 1546047 Fungi Fungi 267 8.639999999999999e-67   NTclustered gi|937343931|dbj|LC002620.1| 1546047 g10334 i0 84.507 98.9298245614035 284 29 98 10 5 284 279 551 Endogone incrassata genes for internal transcribed spacer 2, 28S rRNA, partial sequence, specimen_voucher: KPM:NC0024213 blastn 28195 267 1 Eukaryota Opisthokonta Fungi Mucoromycota Endogonomycetes Endogonales Endogonaceae Endogone Endogone incrassata
21470907 21470907 PRJNA326068_P_NODE_17317_length_193_cov_12.920732_g16354_i0 PRJNA326068 17317 193 12.920732 24.937012759999998 Mucor 4830 Fungi Fungi 350 5.27e-92   NTclustered gi|1473254563|gb|MH867507.1| 311236 g16354 i0 100 96.7720207253886 189 0 98 0 5 193 10 198 Mucor racemosus f. sphaerosporus culture CBS:258.39 strain CBS 258.39 large subunit ribosomal RNA gene, partial sequence blastn 18677 350 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus
25295424 25295424 PRJNA326068_P_NODE_1940_length_774_cov_42.483221_g1449_i0 PRJNA326068 1940 774 42.483221 328.82013054 Fungi 4751 Fungi Fungi 1192 0   NTclustered gi|1694443677|ref|NG_065498.1| 4841 g1449 i0 95.112 97.7351421188631 757 35 98 2 20 774 1310 554 Mucor racemosus NRRL 3640 18S rRNA gene, partial sequence; from TYPE material blastn 75647 1192 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor racemosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;