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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA326068" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA326068 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4216754 4216754 PRJNA326068_P_NODE_6364_length_432_cov_2.364764_g5461_i0 PRJNA326068 6364 432 2.364764 10.21578048 Pseudoloma neurophilia 146866 Fungi Fungi 789 0   NTclustered gi|11993647|gb|AF322654.1| 146866 g5461 i0 99.538 97.1087962962963 433 1 100 1 1 432 1519 1951 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 41951 789 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
6767031 6767031 PRJNA326068_P_NODE_17146_length_196_cov_3.017964_g16183_i0 PRJNA326068 17146 196 3.017964 5.91520944 Pleistophora mulleri 249366 Fungi Fungi 324 3.25e-84   NTclustered gi|134147422|gb|EF119339.1| 249366 g16183 i0 96.447 54.3316326530612 197 5 100 2 1 196 2908 3103 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 10649 324 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri
13822624 13822624 PRJNA326068_P_NODE_1471_length_876_cov_3.299882_g1073_i0 PRJNA326068 1471 876 3.299882 28.90696632 Pleistophoridae 35232 Fungi Fungi 811 0   NTclustered gi|134147422|gb|EF119339.1| 249366 g1073 i0 83.632 22.8767123287671 892 106 99 32 6 876 1881 2753 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 20040 815 0.995092024539877 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri
13822657 13822657 PRJNA326068_P_NODE_8991_length_343_cov_2.337580_g8037_i0 PRJNA326068 8991 343 2.33758 8.0178994 Heterosporis 157917 Fungi Fungi 311 4.85e-80   NTclustered gi|448278458|gb|KC137554.1| 1289055 g8037 i0 94.527 6.45189504373178 201 11 59 0 1 201 3612 3412 Heterosporis sp. NBDP-2013a isolate MN/CISCO small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 2213 311 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Heterosporis Heterosporis sp. NBDP-2013a
15097023 15097023 PRJNA326068_P_NODE_1472_length_876_cov_3.214876_g1073_i1 PRJNA326068 1472 876 3.214876 28.16231376 Pleistophoridae 35232 Fungi Fungi 817 0   NTclustered gi|134147422|gb|EF119339.1| 249366 g1073 i1 83.744 22.8595890410959 892 105 99 32 1 871 2753 1881 Pleistophora mulleri 16S ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 20025 817 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Pleistophora Pleistophora mulleri
16966801 16966801 PRJNA326068_P_NODE_494_length_1342_cov_6.945164_g332_i0 PRJNA326068 494 1342 6.945164 93.20410088 Pseudoloma neurophilia 146866 Fungi Fungi 2446 0   NTclustered gi|11993647|gb|AF322654.1| 146866 g332 i0 99.775 92.0506706408346 1331 3 99 0 1 1331 22 1352 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 123532 2446 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;