RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA326068" and tax_phylum = "Bacillariophyta"

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tax_superkingdom 1

tax_phylum 1

  • Bacillariophyta · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA326068 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19515332 19515332 PRJNA326068_P_NODE_996_length_1030_cov_7.419580_g702_i0 PRJNA326068 996 1030 7.41958 76.421674 Lithodesmioides sp. mgcode 4 2914905 SAR_Eukaryotes SAR_Eukaryotes 228 1.6199999999999998e-54   NTclustered gi|2073953334|gb|MW849271.1| 2914905 g702 i0 79.023 11.1271844660194 348 61 33 11 1 344 5078 5417 Lithodesmioides sp. mgcode 4 isolate Qingdao in China mitochondrion, complete genome blastn 11461 228 1 Eukaryota Sar   Bacillariophyta Mediophyceae Lithodesmiales Lithodesmiaceae Lithodesmioides Lithodesmioides sp. mgcode 4
20790957 20790957 PRJNA326068_P_NODE_8317_length_362_cov_3.729730_g7369_i0 PRJNA326068 8317 362 3.72973 13.5016226 Nitzschia traheaformis 1881117 SAR_Eukaryotes SAR_Eukaryotes 87.9 9.41e-13   NTclustered gi|2073953246|gb|MW849269.1| 1881117 g7369 i0 77.326 1.67955801104972 172 23 47 7 175 344 46645 46488 Nitzschia traheaformis isolate Qingdao in China mitochondrion, complete genome blastn 608 87.9 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia traheaformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;