contig_metadata
9 rows where analysis = "blastn", bioproject = "PRJNA326068" and tax_kingdom = "Fusobacteriati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2940075 | 2940075 | PRJNA326068_P_NODE_4863_length_500_cov_40.267516_g4055_i0 | PRJNA326068 | 4863 | 500 | 40.267516 | 201.33758 | Cetobacterium somerae | 188913 | Bacteria | Bacteria | 889 | 0 | NTclustered | gi|2201062197|gb|CP092519.1| | 188913 | g4055 | i0 | 98.8 | 521.232 | 500 | 5 | 100 | 1 | 1 | 500 | 48913 | 49411 | Cetobacterium somerae strain CS2105-BJ chromosome, complete genome | blastn | 260616 | 889 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 14418284 | 14418284 | PRJNA326068_P_NODE_3512_length_591_cov_364.820285_g2803_i0 | PRJNA326068 | 3512 | 591 | 364.820285 | 2156.08788435 | Leptotrichia sp. oral taxon 221 | 712362 | Bacteria | Bacteria | 599 | 1.6599999999999995e-166 | NTclustered | gi|2028889048|gb|CP072378.1| | 712362 | g2803 | i0 | 85.593 | 89.2825719120135 | 590 | 64 | 99 | 10 | 1 | 587 | 23504 | 24075 | Leptotrichia sp. oral taxon 221 strain F0705 chromosome, complete genome | blastn | 52766 | 599 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 221 | ||
| 15097033 | 15097033 | PRJNA326068_P_NODE_19072_length_163_cov_3.619403_g18109_i0 | PRJNA326068 | 19072 | 163 | 3.619403 | 5.89962689 | Cetobacterium | 180162 | Bacteria | Bacteria | 285 | 1.23e-72 | NTclustered | gi|2666488225|gb|CP143319.1| | 188913 | g18109 | i0 | 98.16 | 13.2822085889571 | 163 | 3 | 100 | 0 | 1 | 163 | 1774391 | 1774229 | Cetobacterium somerae strain ceto chromosome, complete genome | blastn | 2165 | 285 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 16966792 | 16966792 | PRJNA326068_P_NODE_2914_length_645_cov_9.977273_g2283_i0 | PRJNA326068 | 2914 | 645 | 9.977273 | 64.35341085 | Cetobacterium somerae | 188913 | Bacteria | Bacteria | 876 | 0 | NTclustered | gi|2666488225|gb|CP143319.1| | 188913 | g2283 | i0 | 91.244 | 70.768992248062 | 651 | 45 | 99 | 9 | 4 | 644 | 67704 | 67056 | Cetobacterium somerae strain ceto chromosome, complete genome | blastn | 45646 | 876 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 18920644 | 18920644 | PRJNA326068_P_NODE_2915_length_645_cov_9.519481_g2283_i1 | PRJNA326068 | 2915 | 645 | 9.519481 | 61.40065245 | Cetobacterium | 180162 | Bacteria | Bacteria | 872 | 0 | NTclustered | gi|2865366169|gb|CP122292.1| | 188913 | g2283 | i1 | 90.992 | 71.7240310077519 | 655 | 47 | 100 | 8 | 1 | 645 | 1484807 | 1485459 | Cetobacterium somerae strain MSU41 chromosome, complete genome | blastn | 46262 | 872 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 20195249 | 20195249 | PRJNA326068_P_NODE_17316_length_193_cov_13.871951_g16353_i0 | PRJNA326068 | 17316 | 193 | 13.871951 | 26.77286543 | Cetobacterium | 180162 | Bacteria | Bacteria | 346 | 6.82e-91 | NTclustered | gi|2865368125|gb|CP122294.1| | 188913 | g16353 | i0 | 98.964 | 505.015544041451 | 193 | 2 | 100 | 0 | 1 | 193 | 278722 | 278914 | Cetobacterium somerae strain MSU41 plasmid p41_t2, complete sequence | blastn | 97468 | 346 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 20790907 | 20790907 | PRJNA326068_P_NODE_16577_length_203_cov_3.758621_g15614_i0 | PRJNA326068 | 16577 | 203 | 3.758621 | 7.63000063 | Leptotrichia sp. oral taxon 221 | 712362 | Bacteria | Bacteria | 370 | 4.3e-98 | NTclustered | gi|2028889048|gb|CP072378.1| | 712362 | g15614 | i0 | 99.507 | 125.684729064039 | 203 | 1 | 100 | 0 | 1 | 203 | 28206 | 28004 | Leptotrichia sp. oral taxon 221 strain F0705 chromosome, complete genome | blastn | 25514 | 370 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 221 | ||
| 22746073 | 22746073 | PRJNA326068_P_NODE_1358_length_906_cov_99.242873_g981_i0 | PRJNA326068 | 1358 | 906 | 99.242873 | 899.14042938 | Cetobacterium | 180162 | Bacteria | Bacteria | 1454 | 0 | NTclustered | gi|2865368125|gb|CP122294.1| | 188913 | g981 | i0 | 95.7 | 517.870860927152 | 907 | 34 | 99 | 5 | 3 | 906 | 278714 | 279618 | Cetobacterium somerae strain MSU41 plasmid p41_t2, complete sequence | blastn | 469191 | 1454 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 24615552 | 24615552 | PRJNA326068_P_NODE_6100_length_443_cov_4.826087_g5217_i0 | PRJNA326068 | 6100 | 443 | 4.826087 | 21.37956541 | Leptotrichia sp. oral taxon 221 | 712362 | Bacteria | Bacteria | 815 | 0 | NTclustered | gi|2028889048|gb|CP072378.1| | 712362 | g5217 | i0 | 100 | 191.805869074492 | 441 | 0 | 99 | 0 | 3 | 443 | 25333 | 25773 | Leptotrichia sp. oral taxon 221 strain F0705 chromosome, complete genome | blastn | 84970 | 815 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 221 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;