RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA316313" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA316313 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15690821 15690821 PRJNA316313_P_NODE_470553_length_151_cov_3.070175_g469167_i0 PRJNA316313 470553 151 3.070175 4.63596425 Gamsiella multidivaricata 101098 Fungi Fungi 113 5.57e-21   NTclustered gi|2323770538|ref|XM_051553938.1| 101098 g469167 i0 93.421 3.22516556291391 76 5 50 0 3 78 524 449 Gamsiella multidivaricata AP-2 complex subunit sigma (BC939DRAFT_439238), mRNA blastn 487 113 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Gamsiella Gamsiella multidivaricata
19512807 19512807 PRJNA316313_P_NODE_263116_length_187_cov_2.680000_g261730_i0 PRJNA316313 263116 187 2.68 5.0116 Lichtheimia ornata 688661 Fungi Fungi 95.3 2.62e-15   NTclustered gi|2553584937|ref|XM_058487474.1| 688661 g261730 i0 92.424 5.09625668449198 66 5 35 0 112 177 210 275 Lichtheimia ornata T-complex protein 1 subunit beta (O0I10_007458), partial mRNA blastn 953 95.3 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia ornata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;