RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA316313" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA316313 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2936709 2936709 PRJNA316313_P_NODE_130183_length_187_cov_6.953333_g128797_i0 PRJNA316313 130183 187 6.953333 13.00273271 Anemonia sulcata 6108 Cnidaria other_Eukaryota 54.7 0.004   NTclustered gi|2917940712|emb|OZ237560.1| 6108 g128797 i0 96.97 0.176470588235294 33 0 18 1 40 72 11166101 11166132 Anemonia sulcata genome assembly, chromosome: 6 blastn 33 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
16963478 16963478 PRJNA316313_P_NODE_128254_length_188_cov_2.278146_g126868_i0 PRJNA316313 128254 188 2.278146 4.28291448 Anemonia sulcata 6108 Cnidaria other_Eukaryota 58.4 3.46e-4   NTclustered gi|2917940766|emb|OZ237573.1| 6108 g126868 i0 100 4.42021276595745 31 0 16 0 150 180 6485114 6485144 Anemonia sulcata genome assembly, chromosome: 19 blastn 831 58.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata
24612500 24612500 PRJNA316313_P_NODE_15740_length_423_cov_4.137306_g14394_i0 PRJNA316313 15740 423 4.137306 17.50080438 Anemonia sulcata 6108 Cnidaria other_Eukaryota 52.8 0.041   NTclustered gi|2917940687|emb|OZ237555.1| 6108 g14394 i0 100 0.066193853427896 28 0 7 0 241 268 16930281 16930308 Anemonia sulcata genome assembly, chromosome: 1 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;