contig_metadata
7 rows where analysis = "blastn", bioproject = "PRJNA316313" and tax_phylum = "Chloroflexota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 386284 | 386284 | PRJNA316313_P_NODE_152221_length_187_cov_4.593333_g150835_i0 | PRJNA316313 | 152221 | 187 | 4.593333 | 8.58953271 | Dehalococcoidia bacterium | 2026734 | Bacteria | Bacteria | 63.9 | 7.39e-6 | NTclustered | gi|2621706240|emb|OY764155.1| | 2026734 | g150835 | i0 | 88.462 | 10.7754010695187 | 52 | 6 | 28 | 0 | 131 | 182 | 1228416 | 1228365 | MAG: Dehalococcoidia bacterium isolate 8f8fc053-1767-4988-ba26-2aa978362f9c genome assembly, chromosome: 1 | blastn | 2015 | 63.9 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium | |||||
| 5490598 | 5490598 | PRJNA316313_P_NODE_297565_length_187_cov_2.446667_g296179_i0 | PRJNA316313 | 297565 | 187 | 2.446667 | 4.57526729 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 110 | 9.36e-20 | NTclustered | gi|2874253788|emb|OY969772.1| | 1672391 | g296179 | i0 | 93.243 | 0.770053475935829 | 74 | 5 | 40 | 0 | 2 | 75 | 2202092 | 2202165 | MAG: uncultured Chloroflexia bacterium isolate MFD02416.bin.2.42 genome assembly, chromosome: 1 | blastn | 144 | 110 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium | |||||
| 9315311 | 9315311 | PRJNA316313_P_NODE_334048_length_186_cov_2.926174_g332662_i0 | PRJNA316313 | 334048 | 186 | 2.926174 | 5.44268364 | Caldilineaceae bacterium | 2614250 | Bacteria | Bacteria | 65.8 | 2.04e-6 | NTclustered | gi|2621703348|emb|OY760647.1| | 2614250 | g332662 | i0 | 91.667 | 10.1827956989247 | 48 | 3 | 25 | 1 | 11 | 57 | 2908141 | 2908188 | MAG: Caldilineaceae bacterium isolate dd18155e-cfc5-4d95-bdad-01b25ac4382b genome assembly, chromosome: 1 | blastn | 1894 | 65.8 | 1 | Bacteria | Bacillati | Chloroflexota | Caldilineae | Caldilineales | Caldilineaceae | Caldilineaceae bacterium | |||
| 10590622 | 10590622 | PRJNA316313_P_NODE_260749_length_187_cov_2.720000_g259363_i0 | PRJNA316313 | 260749 | 187 | 2.72 | 5.0864 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 60.2 | 9.57e-5 | NTclustered | gi|2874254132|emb|OY970217.1| | 1672391 | g259363 | i0 | 100 | 17.7272727272727 | 32 | 0 | 17 | 0 | 3 | 34 | 113487 | 113456 | MAG: uncultured Chloroflexia bacterium isolate MFD05684.bin.1.130 genome assembly, chromosome: 1 | blastn | 3315 | 60.2 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium | |||||
| 10590966 | 10590966 | PRJNA316313_P_NODE_325169_length_187_cov_2.126667_g323783_i0 | PRJNA316313 | 325169 | 187 | 2.126667 | 3.97686729 | Dehalococcoidia bacterium | 2026734 | Bacteria | Bacteria | 63.9 | 7.39e-6 | NTclustered | gi|2621703649|emb|OY762634.1| | 2026734 | g323783 | i0 | 100 | 308.026737967914 | 34 | 0 | 20 | 0 | 30 | 63 | 2274260 | 2274293 | MAG: Dehalococcoidia bacterium isolate 5218cef7-9544-4829-ade7-f4022e2b34b8 genome assembly, chromosome: 1 | blastn | 57601 | 63.9 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium | |||||
| 10591308 | 10591308 | PRJNA316313_P_NODE_377129_length_162_cov_2.704000_g375743_i0 | PRJNA316313 | 377129 | 162 | 2.704 | 4.38048 | Chloroflexota bacterium | 2026724 | Bacteria | Bacteria | 52.8 | 0.013 | NTclustered | gi|2893358434|emb|OZ220726.1| | 2026724 | g375743 | i0 | 100 | 0.172839506172839 | 28 | 0 | 17 | 0 | 26 | 53 | 384609 | 384636 | MAG: Chloroflexota bacterium isolate 6b50408d-bb21-410b-bf53-c761b53f873e genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexota bacterium | ||||||
| 18239762 | 18239762 | PRJNA316313_P_NODE_475135_length_151_cov_2.798246_g473749_i0 | PRJNA316313 | 475135 | 151 | 2.798246 | 4.22535146 | Dehalococcoidia bacterium | 2026734 | Bacteria | Bacteria | 73.1 | 9.46e-9 | NTclustered | gi|2626282194|emb|OY839116.1| | 2026734 | g473749 | i0 | 93.75 | 4.13245033112583 | 48 | 3 | 32 | 0 | 29 | 76 | 2947958 | 2948005 | MAG: Dehalococcoidia bacterium isolate 44b3abb6-b6b9-4f11-be96-93ee54cc77f6 genome assembly, chromosome: 1 | blastn | 624 | 73.1 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;