contig_metadata
25 rows where analysis = "blastn", bioproject = "PRJNA315399" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 381674 | 381674 | PRJNA315399_P_NODE_175661_length_186_cov_8.187919_g175213_i0 | PRJNA315399 | 175661 | 186 | 8.187919 | 15.22952934 | Luteolibacter sp. Populi | 3230487 | Bacteria | Bacteria | 65.8 | 2.04e-6 | NTclustered | gi|2774618348|gb|CP161812.1| | 3230487 | g175213 | i0 | 91.489 | 0.704301075268817 | 47 | 4 | 25 | 0 | 38 | 84 | 5649057 | 5649103 | Luteolibacter sp. Populi chromosome, complete genome | blastn | 131 | 65.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. Populi | |
| 381680 | 381680 | PRJNA315399_P_NODE_176901_length_186_cov_6.718121_g176453_i0 | PRJNA315399 | 176901 | 186 | 6.718121 | 12.49570506 | Congregicoccus parvus | 3081749 | Bacteria | Bacteria | 71.3 | 4.39e-8 | NTclustered | gi|2599616993|dbj|AP028972.1| | 3081749 | g176453 | i0 | 92 | 0.268817204301075 | 50 | 4 | 27 | 0 | 112 | 161 | 2346903 | 2346854 | Opitutales bacterium ASA1 DNA, complete genome | blastn | 50 | 71.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Alterococcaceae | Congregicoccus | Congregicoccus parvus | |
| 382301 | 382301 | PRJNA315399_P_NODE_281701_length_179_cov_16.852113_g281253_i0 | PRJNA315399 | 281701 | 179 | 16.852113 | 30.16528227 | Termitidicoccus mucosus | 1184151 | Bacteria | Bacteria | 71.3 | 4.19e-8 | NTclustered | gi|2724066732|gb|CP109796.1| | 1184151 | g281253 | i0 | 97.561 | 0.402234636871508 | 41 | 1 | 23 | 0 | 26 | 66 | 746141 | 746181 | Termitidicoccus mucosus strain TSB47 chromosome, complete genome | blastn | 72 | 71.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Termitidicoccus | Termitidicoccus mucosus | |
| 383819 | 383819 | PRJNA315399_P_NODE_63301_length_223_cov_10.268817_g62853_i0 | PRJNA315399 | 63301 | 223 | 10.268817 | 22.89946191 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 230 | 8.52e-56 | NTclustered | gi|1888387165|gb|CP058562.1| | 239935 | g62853 | i0 | 100 | 83.7399103139013 | 124 | 0 | 86 | 0 | 87 | 210 | 1113479 | 1113602 | Akkermansia muciniphila strain AK32 chromosome, complete genome | blastn | 18674 | 230 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 1656572 | 1656572 | PRJNA315399_P_NODE_194682_length_185_cov_4.358108_g194234_i0 | PRJNA315399 | 194682 | 185 | 4.358108 | 8.0624998 | Opitutales bacterium | 2026772 | Bacteria | Bacteria | 62.1 | 2.62e-5 | NTclustered | gi|2626245913|emb|OY829953.1| | 2026772 | g194234 | i0 | 93.023 | 273.767567567568 | 43 | 2 | 23 | 1 | 17 | 59 | 4282973 | 4283014 | MAG: Opitutales bacterium isolate cf0dc631-26ae-4be7-9546-4b6096dd6533 genome assembly, chromosome: 1 | blastn | 50647 | 62.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutales bacterium | |||
| 1656720 | 1656720 | PRJNA315399_P_NODE_219142_length_183_cov_13.856164_g218694_i0 | PRJNA315399 | 219142 | 183 | 13.856164 | 25.35678012 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 52.8 | 0.016 | NTclustered | gi|2874254020|emb|OY970345.1| | 412056 | g218694 | i0 | 100 | 0.153005464480874 | 28 | 0 | 15 | 0 | 136 | 163 | 2701015 | 2701042 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04212.bin.2.122 genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 2341265 | 2341265 | PRJNA315399_P_NODE_37962_length_255_cov_18.197248_g37515_i0 | PRJNA315399 | 37962 | 255 | 18.197248 | 46.4029824 | Akkermansia | 239934 | Bacteria | Bacteria | 135 | 2.24e-27 | NTclustered | gi|1888387165|gb|CP058562.1| | 239935 | g37515 | i0 | 98.684 | 70.2980392156863 | 76 | 1 | 75 | 0 | 162 | 237 | 2931449 | 2931524 | Akkermansia muciniphila strain AK32 chromosome, complete genome | blastn | 17926 | 135 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 3617691 | 3617691 | PRJNA315399_S_NODE_72443_length_194_cov_4.611465_g72242_i0 | PRJNA315399 | 72443 | 194 | 4.611465 | 8.9462421 | Verrucomicrobiales | 48461 | Bacteria | Bacteria | 257 | 3.31e-64 | NTclustered | gi|1774728408|gb|MN684281.1| | 2736 | g72242 | i0 | 97.351 | 77.7731958762887 | 151 | 4 | 78 | 0 | 41 | 191 | 839 | 689 | Verrucomicrobium spinosum strain MT_SG_E_24_27F.27F 16S ribosomal RNA gene, partial sequence | blastn | 15088 | 259 | 0.992277992277992 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobium | Verrucomicrobium spinosum | |
| 5486479 | 5486479 | PRJNA315399_P_NODE_380885_length_164_cov_2.330709_g380437_i0 | PRJNA315399 | 380885 | 164 | 2.330709 | 3.82236276 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 235 | 1.27e-57 | NTclustered | gi|2051360498|gb|CP072032.1| | 239935 | g380437 | i0 | 98.507 | 4.90243902439024 | 134 | 0 | 82 | 1 | 15 | 148 | 1568044 | 1568175 | Akkermansia muciniphila strain Akk1613 chromosome, complete genome | blastn | 804 | 235 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 6762922 | 6762922 | PRJNA315399_S_NODE_43446_length_223_cov_4.489247_g43245_i0 | PRJNA315399 | 43446 | 223 | 4.489247 | 10.01102081 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 270 | 5.02e-68 | NTclustered | gi|2874253779|emb|OY969763.1| | 412056 | g43245 | i0 | 92.188 | 127.322869955157 | 192 | 13 | 86 | 2 | 11 | 201 | 3833035 | 3833225 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1 | blastn | 28393 | 270 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 10585761 | 10585761 | PRJNA315399_P_NODE_219009_length_183_cov_15.075342_g218561_i0 | PRJNA315399 | 219009 | 183 | 15.075342 | 27.58787586 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 230 | 6.71e-56 | NTclustered | gi|1888387165|gb|CP058562.1| | 239935 | g218561 | i0 | 88.75 | 77.8142076502732 | 160 | 18 | 87 | 0 | 10 | 169 | 1070244 | 1070085 | Akkermansia muciniphila strain AK32 chromosome, complete genome | blastn | 14240 | 230 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 10588117 | 10588117 | PRJNA315399_S_NODE_125029_length_168_cov_6.366412_g124828_i0 | PRJNA315399 | 125029 | 168 | 6.366412 | 10.69557216 | Chthoniobacter flavus | 191863 | Bacteria | Bacteria | 217 | 4.73e-52 | NTclustered | gi|183579828|emb|AM905425.1| | 497964 | g124828 | i0 | 91.667 | 15.0654761904762 | 156 | 13 | 93 | 0 | 1 | 156 | 1018 | 863 | Chthoniobacter flavus 23S rRNA gene, strain Ellin428 | blastn | 2531 | 217 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacter | Chthoniobacter flavus | |
| 11268932 | 11268932 | PRJNA315399_P_NODE_256209_length_181_cov_4.930556_g255761_i0 | PRJNA315399 | 256209 | 181 | 4.930556 | 8.92430636 | root | 1 | Root_unresolved | Root_unresolved | 117 | 5.38e-22 | NTclustered | gi|2566450153|gb|CP114596.1| | 239935 | g255761 | i0 | 94.667 | 13.2541436464088 | 75 | 4 | 77 | 0 | 100 | 174 | 2542451 | 2542377 | Akkermansia muciniphila strain MmAkk2 chromosome, complete genome | blastn | 2399 | 117 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 15685523 | 15685523 | PRJNA315399_P_NODE_375613_length_164_cov_8.929134_g375165_i0 | PRJNA315399 | 375613 | 164 | 8.929134 | 14.64377976 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 237 | 3.52e-58 | NTclustered | gi|1888387165|gb|CP058562.1| | 239935 | g375165 | i0 | 95.973 | 45.4268292682927 | 149 | 0 | 87 | 1 | 15 | 157 | 1364467 | 1364319 | Akkermansia muciniphila strain AK32 chromosome, complete genome | blastn | 7450 | 237 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 18234071 | 18234071 | PRJNA315399_P_NODE_307015_length_178_cov_4.581560_g306567_i0 | PRJNA315399 | 307015 | 178 | 4.58156 | 8.1551768 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 54.7 | 0.004 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g306567 | i0 | 96.97 | 0.185393258426966 | 33 | 0 | 18 | 1 | 142 | 173 | 2565724 | 2565756 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 33 | 54.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 18237263 | 18237263 | PRJNA315399_S_NODE_77795_length_190_cov_16.607843_g77594_i0 | PRJNA315399 | 77795 | 190 | 16.607843 | 31.5549017 | Horticoccus luteus | 2862869 | Bacteria | Bacteria | 91.6 | 3.46e-14 | NTclustered | gi|2077391884|gb|CP080507.1| | 2862869 | g77594 | i0 | 85.882 | 0.447368421052632 | 85 | 12 | 45 | 0 | 82 | 166 | 2843267 | 2843351 | Horticoccus luteus strain KSB-15 chromosome, complete genome | blastn | 85 | 91.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Horticoccus | Horticoccus luteus | |
| 19508282 | 19508282 | PRJNA315399_P_NODE_283796_length_179_cov_7.852113_g283348_i0 | PRJNA315399 | 283796 | 179 | 7.852113 | 14.05528227 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 139 | 1.13e-28 | NTclustered | gi|1554497555|gb|CP025833.1| | 239935 | g283348 | i0 | 100 | 20.268156424581 | 75 | 0 | 78 | 0 | 4 | 78 | 2216018 | 2215944 | Akkermansia muciniphila strain EB-AMDK-18 chromosome, complete genome | blastn | 3628 | 139 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 20785016 | 20785016 | PRJNA315399_P_NODE_490157_length_152_cov_3.417391_g489709_i0 | PRJNA315399 | 490157 | 152 | 3.417391 | 5.19443432 | Luteolibacter sp. SL250 | 2995170 | Bacteria | Bacteria | 148 | 1.54e-31 | NTclustered | gi|2381117106|gb|CP113054.1| | 2995170 | g489709 | i0 | 86.131 | 0.901315789473684 | 137 | 19 | 90 | 0 | 11 | 147 | 3469664 | 3469800 | Luteolibacter sp. SL250 chromosome | blastn | 137 | 148 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. SL250 | |
| 20787113 | 20787113 | PRJNA315399_S_NODE_73957_length_193_cov_4.237179_g73756_i0 | PRJNA315399 | 73957 | 193 | 4.237179 | 8.17775547 | Lacunisphaera limnophila | 1838286 | Bacteria | Bacteria | 303 | 4.16e-78 | NTclustered | gi|1070531674|gb|CP016094.1| | 1838286 | g73756 | i0 | 96.703 | 49.9170984455959 | 182 | 6 | 94 | 0 | 12 | 193 | 2556188 | 2556369 | Lacunisphaera limnophila strain IG16b, complete genome | blastn | 9634 | 303 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Lacunisphaera | Lacunisphaera limnophila | |
| 20787139 | 20787139 | PRJNA315399_S_NODE_76117_length_192_cov_1.529032_g75916_i0 | PRJNA315399 | 76117 | 192 | 1.529032 | 2.93574144 | Luteolibacter sp. AS25 | 3135776 | Bacteria | Bacteria | 255 | 1.17e-63 | NTclustered | gi|2889346039|gb|CP151837.1| | 3135776 | g75916 | i0 | 90.625 | 41.5520833333333 | 192 | 18 | 100 | 0 | 1 | 192 | 454596 | 454787 | Luteolibacter sp. AS25 chromosome, complete genome | blastn | 7978 | 255 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. AS25 | |
| 20787262 | 20787262 | PRJNA315399_S_NODE_87197_length_185_cov_2.905405_g86996_i0 | PRJNA315399 | 87197 | 185 | 2.905405 | 5.37499925 | Verrucomicrobia bacterium IMCC26134 | 1637999 | Bacteria | Bacteria | 204 | 4.119999999999999e-48 | NTclustered | gi|807238858|gb|CP011265.1| | 1637999 | g86996 | i0 | 89.506 | 8.25405405405405 | 162 | 16 | 88 | 1 | 10 | 171 | 440249 | 440089 | Verrucomicrobia bacterium IMCC26134, complete genome | blastn | 1527 | 204 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobia bacterium IMCC26134 | |||||
| 22059886 | 22059886 | PRJNA315399_P_NODE_464178_length_154_cov_12.350427_g463730_i0 | PRJNA315399 | 464178 | 154 | 12.350427 | 19.01965758 | Luteolibacter ambystomatis | 2824561 | Bacteria | Bacteria | 67.6 | 4.51e-7 | NTclustered | gi|2029343589|gb|CP073100.1| | 2824561 | g463730 | i0 | 93.478 | 0.298701298701299 | 46 | 2 | 29 | 1 | 42 | 86 | 111340 | 111295 | Luteolibacter ambystomatis strain 32A chromosome, complete genome | blastn | 46 | 67.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter ambystomatis | |
| 23333706 | 23333706 | PRJNA315399_P_NODE_185359_length_186_cov_2.489933_g184911_i0 | PRJNA315399 | 185359 | 186 | 2.489933 | 4.63127538 | Luteolibacter sp. LG18 | 2819286 | Bacteria | Bacteria | 143 | 9.17e-30 | NTclustered | gi|2585939279|dbj|AP024600.1| | 2819286 | g184911 | i0 | 78.495 | 34.5645161290323 | 186 | 35 | 97 | 2 | 6 | 186 | 3078255 | 3078440 | Luteolibacter sp. LG18 DNA, complete genome | blastn | 6429 | 143 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. LG18 | |
| 23333756 | 23333756 | PRJNA315399_P_NODE_191339_length_185_cov_6.398649_g190891_i0 | PRJNA315399 | 191339 | 185 | 6.398649 | 11.83750065 | Akkermansia muciniphila | 239935 | Bacteria | Bacteria | 174 | 3.23e-39 | NTclustered | gi|1805906055|gb|CP027004.1| | 239935 | g190891 | i0 | 86.145 | 230.016216216216 | 166 | 6 | 90 | 2 | 8 | 173 | 377938 | 378086 | Akkermansia muciniphila strain EB-AMDK-28 chromosome, complete genome | blastn | 42553 | 174 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansia | Akkermansia muciniphila | |
| 23337143 | 23337143 | PRJNA315399_S_NODE_35739_length_236_cov_2.281407_g35538_i0 | PRJNA315399 | 35739 | 236 | 2.281407 | 5.38412052 | Akkermansiaceae bacterium | 2562705 | Bacteria | Bacteria | 303 | 5.29e-78 | NTclustered | gi|2022020957|gb|CP059069.1| | 2562705 | g35538 | i0 | 92.823 | 227.940677966102 | 209 | 15 | 89 | 0 | 1 | 209 | 3413520 | 3413728 | Akkermansiaceae bacterium strain AJA081-3 chromosome, complete genome | blastn | 53794 | 303 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Akkermansiaceae | Akkermansiaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;