RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA315399" and tax_phylum = "Thermoproteota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoproteota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA315399 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15093871 15093871 PRJNA315399_P_NODE_436412_length_157_cov_16.058333_g435964_i0 PRJNA315399 436412 157 16.058333 25.21158281 Sulfolobus 2284 Archaea Archaea 56.5 0.001   NTclustered gi|969874815|gb|CP013695.1| 2285 g435964 i0 100 4.43312101910828 30 0 37 0 7 36 1176951 1176922 Sulfolobus acidocaldarius strain NG05B_CO5_07 chromosome blastn 696 56.5 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Sulfolobus Sulfolobus acidocaldarius
20192018 20192018 PRJNA315399_P_NODE_346896_length_170_cov_4.706767_g346448_i0 PRJNA315399 346896 170 4.706767 8.0015039 Sulfurisphaera 69655 Archaea Archaea 71.3 3.92e-8   NTclustered gi|1780177153|gb|CP045484.1| 69656 g346448 i0 93.617 1.09411764705882 47 3 28 0 110 156 1080594 1080548 Sulfurisphaera ohwakuensis strain TA-1 chromosome, complete genome blastn 186 71.3 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Sulfurisphaera Sulfurisphaera ohwakuensis
22060731 22060731 PRJNA315399_S_NODE_117138_length_171_cov_4.365672_g116937_i0 PRJNA315399 117138 171 4.365672 7.46529912 uncultured crenarchaeote 29281 Archaea Archaea 257 2.83e-64   NTclustered gi|42557759|emb|AJ627422.1| 29281 g116937 i0 97.351 52.9883040935673 151 4 88 0 1 151 32520 32670 Uncultured crenarchaeote genomic fragment 54d9 blastn 9061 257 1 Archaea   Thermoproteati Thermoproteota         uncultured crenarchaeote

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;