contig_metadata
19 rows where analysis = "blastn", bioproject = "PRJNA315399" and tax_phylum = "Mycoplasmatota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1657850 | 1657850 | PRJNA315399_P_NODE_416902_length_160_cov_1.357724_g416454_i0 | PRJNA315399 | 416902 | 160 | 1.357724 | 2.1723584 | uncultured Mycoplasmatota bacterium | 658143 | Bacteria | Bacteria | 250 | 4.38e-62 | NTclustered | gi|2187152066|emb|OV788644.1| | 658143 | g416454 | i0 | 99.275 | 1.04375 | 138 | 1 | 86 | 0 | 15 | 152 | 738822 | 738685 | uncultured Tenericutes bacterium isolate min17_bin35 genome assembly, chromosome: 1 | blastn | 167 | 250 | 1 | Bacteria | Bacillati | Mycoplasmatota | uncultured Mycoplasmatota bacterium | ||||||
| 8034459 | 8034459 | PRJNA315399_P_NODE_110187_length_197_cov_7.050000_g109739_i0 | PRJNA315399 | 110187 | 197 | 7.05 | 13.8885 | Acholeplasmataceae bacterium | 1898209 | Bacteria | Bacteria | 52.8 | 0.017 | NTclustered | gi|2907625690|emb|OZ223250.1| | 1898209 | g109739 | i0 | 100 | 0.142131979695431 | 28 | 0 | 14 | 0 | 13 | 40 | 1478206 | 1478179 | MAG: Acholeplasmataceae bacterium isolate c289da16-4743-485f-819d-17f5771af8e7 genome assembly, chromosome: 1 | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Acholeplasmatales | Acholeplasmataceae | Acholeplasmataceae bacterium | |||
| 8037627 | 8037627 | PRJNA315399_S_NODE_131387_length_166_cov_4.829457_g131186_i0 | PRJNA315399 | 131387 | 166 | 4.829457 | 8.01689862 | Metamycoplasma buccale | 55602 | Bacteria | Bacteria | 111 | 2.26e-20 | NTclustered | gi|2890643647|gb|CP177249.1| | 55602 | g131186 | i0 | 83.065 | 2.62650602409639 | 124 | 20 | 75 | 1 | 9 | 132 | 521935 | 521813 | Metamycoplasma buccale strain CH20247 chromosome, complete genome | blastn | 436 | 111 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Metamycoplasma | Metamycoplasma buccale | |||
| 10587306 | 10587306 | PRJNA315399_P_NODE_477849_length_153_cov_4.275862_g477401_i0 | PRJNA315399 | 477849 | 153 | 4.275862 | 6.54206886 | Spiroplasma ixodetis | 2141 | Bacteria | Bacteria | 228 | 1.9399999999999995e-55 | NTclustered | gi|2721114795|dbj|AP028955.1| | 2141 | g477401 | i0 | 97.059 | 440.183006535948 | 136 | 3 | 89 | 1 | 7 | 142 | 463237 | 463371 | Spiroplasma ixodetis sAp269 DNA, complete genome | blastn | 67348 | 228 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Entomoplasmatales | Spiroplasmataceae | Spiroplasma | Spiroplasma ixodetis | ||
| 11269408 | 11269408 | PRJNA315399_P_NODE_465289_length_154_cov_7.487179_g464841_i0 | PRJNA315399 | 465289 | 154 | 7.487179 | 11.53025566 | Ureaplasma | 2129 | Bacteria | Bacteria | 180 | 5.56e-41 | NTclustered | gi|1493548740|dbj|AP018561.1| | 38504 | g464841 | i0 | 89.032 | 10.9545454545455 | 155 | 3 | 92 | 1 | 14 | 154 | 551647 | 551493 | Ureaplasma parvum serovar 3 OMC-P162 DNA, complete genome | blastn | 1687 | 180 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Mycoplasmoidaceae | Ureaplasma | Ureaplasma parvum | |||
| 13136099 | 13136099 | PRJNA315399_P_NODE_295371_length_179_cov_3.119718_g294923_i0 | PRJNA315399 | 295371 | 179 | 3.119718 | 5.58429522 | Spiroplasma endosymbiont of Andrena trimmerana | 3066316 | Bacteria | Bacteria | 130 | 6.81e-26 | NTclustered | gi|2706542393|emb|OZ026455.1| | 3066316 | g294923 | i0 | 98.63 | 97.4469273743017 | 73 | 1 | 79 | 0 | 13 | 85 | 211686 | 211758 | Spiroplasma endosymbiont of Andrena trimmerana isolate 54785 genome assembly, chromosome: 1 | blastn | 17443 | 130 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Entomoplasmatales | Spiroplasmataceae | Spiroplasma | Spiroplasma endosymbiont of Andrena trimmerana | ||
| 13137284 | 13137284 | PRJNA315399_P_NODE_487631_length_152_cov_4.739130_g487183_i0 | PRJNA315399 | 487631 | 152 | 4.73913 | 7.2034776 | Mycoplasmopsis edwardii | 53558 | Bacteria | Bacteria | 135 | 1.2e-27 | NTclustered | gi|2425261263|gb|CP114370.1| | 53558 | g487183 | i0 | 84.892 | 3.19736842105263 | 139 | 16 | 89 | 3 | 6 | 140 | 127024 | 127161 | Mycoplasmopsis edwardii strain felid995 chromosome, complete genome | blastn | 486 | 135 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis edwardii | |||
| 14414113 | 14414113 | PRJNA315399_S_NODE_35092_length_237_cov_3.265000_g34891_i0 | PRJNA315399 | 35092 | 237 | 3.265 | 7.73805 | Mycoplasmopsis bovis | 28903 | Bacteria | Bacteria | 54.7 | 0.006 | NTclustered | gi|1951496305|gb|CP058499.1| | 28903 | g34891 | i0 | 100 | 0.244725738396624 | 29 | 0 | 24 | 0 | 2 | 30 | 208183 | 208211 | Mycoplasmopsis bovis strain Mb174 chromosome | blastn | 58 | 54.7 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis bovis | |||
| 16958531 | 16958531 | PRJNA315399_P_NODE_101274_length_201_cov_2.676829_g100826_i0 | PRJNA315399 | 101274 | 201 | 2.676829 | 5.38042629 | uncultured Mycoplasmatota bacterium | 658143 | Bacteria | Bacteria | 54.7 | 0.005 | NTclustered | gi|2187163482|emb|OV788640.1| | 658143 | g100826 | i0 | 100 | 0.144278606965174 | 29 | 0 | 14 | 0 | 168 | 196 | 510819 | 510847 | uncultured Tenericutes bacterium isolate min17_bin11 genome assembly, chromosome: 1 | blastn | 29 | 54.7 | 1 | Bacteria | Bacillati | Mycoplasmatota | uncultured Mycoplasmatota bacterium | ||||||
| 16959133 | 16959133 | PRJNA315399_P_NODE_191294_length_185_cov_6.452703_g190846_i0 | PRJNA315399 | 191294 | 185 | 6.452703 | 11.93750055 | Metamycoplasma faucium | 56142 | Bacteria | Bacteria | 54.7 | 0.004 | NTclustered | gi|2708452869|gb|CP088155.1| | 56142 | g190846 | i0 | 100 | 0.313513513513514 | 29 | 0 | 16 | 0 | 18 | 46 | 61933 | 61961 | Metamycoplasma faucium strain UMCG-MFM1 chromosome, complete genome | blastn | 58 | 54.7 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Metamycoplasma | Metamycoplasma faucium | |||
| 17643163 | 17643163 | PRJNA315399_P_NODE_150034_length_189_cov_2.690789_g149586_i0 | PRJNA315399 | 150034 | 189 | 2.690789 | 5.08559121 | Ureaplasma | 2129 | Bacteria | Bacteria | 228 | 2.5099999999999996e-55 | NTclustered | gi|1493548740|dbj|AP018561.1| | 38504 | g149586 | i0 | 91.772 | 9.1957671957672 | 158 | 7 | 84 | 2 | 24 | 181 | 348593 | 348442 | Ureaplasma parvum serovar 3 OMC-P162 DNA, complete genome | blastn | 1738 | 228 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Mycoplasmoidaceae | Ureaplasma | Ureaplasma parvum | |||
| 17643169 | 17643169 | PRJNA315399_P_NODE_151634_length_188_cov_14.940397_g151186_i0 | PRJNA315399 | 151634 | 188 | 14.940397 | 28.08794636 | Ureaplasma | 2129 | Bacteria | Bacteria | 141 | 3.34e-29 | NTclustered | gi|1493548740|dbj|AP018561.1| | 38504 | g151186 | i0 | 100 | 10.8510638297872 | 76 | 0 | 80 | 0 | 98 | 173 | 99520 | 99445 | Ureaplasma parvum serovar 3 OMC-P162 DNA, complete genome | blastn | 2040 | 141 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Mycoplasmoidaceae | Ureaplasma | Ureaplasma parvum | |||
| 18917635 | 18917635 | PRJNA315399_P_NODE_455875_length_155_cov_7.788136_g455427_i0 | PRJNA315399 | 455875 | 155 | 7.788136 | 12.0716108 | Bacteria | 2 | Bacteria | Bacteria | 100 | 4.49e-17 | NTclustered | gi|1403529253|emb|LS483439.1| | 2148 | g455427 | i0 | 93.939 | 41.5935483870968 | 66 | 4 | 43 | 0 | 9 | 74 | 74235 | 74170 | Acholeplasma laidlawii strain NCTC10116 genome assembly, chromosome: 1 | blastn | 6447 | 100 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Acholeplasmatales | Acholeplasmataceae | Acholeplasma | Acholeplasma laidlawii | ||
| 19507644 | 19507644 | PRJNA315399_P_NODE_179356_length_186_cov_4.859060_g178908_i0 | PRJNA315399 | 179356 | 186 | 4.85906 | 9.0378516 | Candidatus Hepatoplasma crinochetorum | 295596 | Bacteria | Bacteria | 215 | 1.92e-51 | NTclustered | gi|2416256950|dbj|AP027132.1| | 295596 | g178908 | i0 | 86.42 | 2.08064516129032 | 162 | 21 | 87 | 1 | 12 | 172 | 380729 | 380568 | MAG: Candidatus Hepatoplasma crinochetorum Tokyo2021 DNA, complete genome | blastn | 387 | 215 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Candidatus Hepatoplasmataceae | Candidatus Hepatoplasma | Candidatus Hepatoplasma crinochetorum | ||
| 19511211 | 19511211 | PRJNA315399_S_NODE_37916_length_232_cov_2.610256_g37715_i0 | PRJNA315399 | 37916 | 232 | 2.610256 | 6.05579392 | Mycoplasma mycoides | 2102 | Bacteria | Bacteria | 52.8 | 0.021 | NTclustered | gi|2040375687|gb|CP065584.1| | 40477 | g37715 | i0 | 100 | 0.120689655172414 | 28 | 0 | 12 | 0 | 178 | 205 | 31319 | 31346 | Mycoplasma mycoides subsp. capri strain 7730 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma mycoides | ||
| 22061434 | 22061434 | PRJNA315399_S_NODE_24898_length_262_cov_4.444444_g24697_i0 | PRJNA315399 | 24898 | 262 | 4.444444 | 11.64444328 | Palm lethal yellowing phytoplasma | 39646 | Bacteria | Bacteria | 54.7 | 0.007 | NTclustered | gi|213389864|gb|FJ416453.1| | 39646 | g24697 | i0 | 92.308 | 0.148854961832061 | 39 | 2 | 15 | 1 | 163 | 201 | 1552 | 1515 | Palm lethal yellowing phytoplasma strain LYSS putative CTP synthase gene, partial cds; and putative membrane protein, putative DNA replication initiation protein, putative ribonuclease III, putative fatty acid/phospholipid biosynthesis enzyme, putative ATP-dependent DNA helicase, putative asparaginyl tRNA synthetase, ABC-type maltose/maltodextrin transport system, ATP-binding protein, ABC-type maltose transport system, permease component, ABC-type maltose transport system, permease protein, sugar-binding periplasmic protein, exopolyphosphatase-related protein, tRNA modification GTPase, and threonyl tRNA synthetase genes, complete cds | blastn | 39 | 54.7 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Acholeplasmatales | Acholeplasmataceae | Candidatus Phytoplasma | Palm lethal yellowing phytoplasma | ||
| 23334290 | 23334290 | PRJNA315399_P_NODE_275399_length_180_cov_3.419580_g274951_i0 | PRJNA315399 | 275399 | 180 | 3.41958 | 6.155244 | Candidatus Hepatoplasma scabrum | 3132033 | Bacteria | Bacteria | 52.8 | 0.015 | NTclustered | gi|2416257524|dbj|AP027133.1| | 3132033 | g274951 | i0 | 100 | 0.155555555555556 | 28 | 0 | 16 | 0 | 9 | 36 | 584581 | 584608 | MAG: Candidatus Hepatoplasma scabrum Ps-JP DNA, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Candidatus Hepatoplasmataceae | Candidatus Hepatoplasma | Candidatus Hepatoplasma scabrum | ||
| 24608764 | 24608764 | PRJNA315399_P_NODE_334080_length_174_cov_3.277372_g333632_i0 | PRJNA315399 | 334080 | 174 | 3.277372 | 5.70262728 | Mycoplasmopsis cynos | 171284 | Bacteria | Bacteria | 56.5 | 0.001 | NTclustered | gi|2639807123|gb|CP141042.1| | 171284 | g333632 | i0 | 94.444 | 0.586206896551724 | 36 | 2 | 21 | 0 | 5 | 40 | 946204 | 946169 | Mycoplasmopsis cynos strain 80950 chromosome | blastn | 102 | 56.5 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis cynos | |||
| 24608986 | 24608986 | PRJNA315399_P_NODE_367620_length_166_cov_2.131783_g367172_i0 | PRJNA315399 | 367620 | 166 | 2.131783 | 3.53875978 | Mycoplasmatota bacterium | 2231116 | Bacteria | Bacteria | 52.8 | 0.014 | NTclustered | gi|2047331642|gb|CP076021.1| | 2231116 | g367172 | i0 | 96.875 | 0.192771084337349 | 32 | 0 | 19 | 1 | 135 | 166 | 515618 | 515588 | Tenericutes bacterium strain zrk7 chromosome, complete genome | blastn | 32 | 52.8 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmatota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;