RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA315399" and tax_phylum = "Cressdnaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Cressdnaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA315399 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8039039 8039039 PRJNA315399_S_NODE_85807_length_186_cov_1.758389_g85606_i0 PRJNA315399 85807 186 1.758389 3.27060354 Red panda feces-associated circular DNA virus 17 2863970 Viruses Viruses 250 5.25e-62   NTclustered gi|2099633191|gb|MZ556186.1| 2863970 g85606 i0 90.86 1 186 17 100 0 1 186 1291 1476 Red panda feces-associated circular DNA virus 17 isolate Rpf280cress07-12 genomic sequence blastn 186 250 1 Viruses   Shotokuvirae Cressdnaviricota         Red panda feces-associated circular DNA virus 17
15687171 15687171 PRJNA315399_S_NODE_148773_length_161_cov_3.508065_g148572_i0 PRJNA315399 148773 161 3.508065 5.64798465 Gemykrogvirus 1985367 Viruses Viruses 267 4.39e-67   NTclustered gi|2045610848|gb|MW183017.1| 1985367 g148572 i0 97.436 6.78260869565217 156 4 97 0 1 156 2104 1949 MAG: Gemykrogvirus isolate thr147gen1, complete genome blastn 1092 267 1 Viruses   Shotokuvirae Cressdnaviricota Repensiviricetes Geplafuvirales Genomoviridae Gemykrogvirus  

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;