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contig_metadata

30 rows where analysis = "blastn", bioproject = "PRJNA315399" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 30 ✖

tax_clade 1

bioproject 1

  • PRJNA315399 · 30 ✖

analysis 1

  • blastn · 30 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1658871 1658871 PRJNA315399_S_NODE_107442_length_175_cov_3.420290_g107241_i0 PRJNA315399 107442 175 3.42029 5.9855075 Pseudocohnilembus hargisi 223571 SAR_Eukaryotes SAR_Eukaryotes 292 7.98e-75   NTclustered gi|41394428|gb|AY513753.1| 223571 g107241 i0 99.379 87.5828571428571 161 1 92 0 1 161 301 141 Pseudocohnilembus hargisi isolate P52 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 15327 292 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus hargisi
1659632 1659632 PRJNA315399_S_NODE_20802_length_276_cov_11.866109_g20601_i0 PRJNA315399 20802 276 11.866109 32.75046084 Philasterides dicentrarchi 282688 SAR_Eukaryotes SAR_Eukaryotes 278 3.85e-70   NTclustered gi|1484640847|gb|MK002746.1| 282688 g20601 i0 84.946 66.2644927536232 279 36 100 5 1 276 4188 4463 Philasterides dicentrarchi isolate I1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 18289 278 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Philasteridae Philasterides Philasterides dicentrarchi
2341733 2341733 PRJNA315399_S_NODE_101562_length_178_cov_1.588652_g101361_i0 PRJNA315399 101562 178 1.588652 2.82780056 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.015   NTclustered gi|4730939|gb|AF060454.1| 88563 g101361 i0 100 13.5056179775281 28 0 16 0 11 38 591 618 Platyophrya vorax small subunit ribosomal RNA gene, complete sequence blastn 2404 52.8 1 Eukaryota Sar   Ciliophora Colpodea Cyrtolophosidida Platyophryidae Platyophrya Platyophrya vorax
2342133 2342133 PRJNA315399_S_NODE_31042_length_245_cov_75.701923_g30841_i0 PRJNA315399 31042 245 75.701923 185.46971135 root 1 Root_unresolved Root_unresolved 388 1.48e-103   NTclustered gi|10782|emb|X54004.1| 5908 g30841 i0 99.074 78.3714285714286 216 2 88 0 14 229 2946 3161 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 19201 388 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
2934999 2934999 PRJNA315399_S_NODE_131663_length_166_cov_4.093023_g131462_i0 PRJNA315399 131663 166 4.093023 6.79441818 Thigmokeronopsis stoecki 552938 SAR_Eukaryotes SAR_Eukaryotes 75 2.97e-9   NTclustered gi|404425851|gb|JQ424844.1| 552938 g131462 i0 97.674 3.13855421686747 43 1 26 0 99 141 162 204 Thigmokeronopsis stoecki voucher LLQ07052501 28S ribosomal RNA gene, partial sequence blastn 521 75 1 Eukaryota Sar   Ciliophora Spirotrichea Urostylida Pseudokeronopsidae Thigmokeronopsis Thigmokeronopsis stoecki
6762218 6762218 PRJNA315399_S_NODE_151826_length_160_cov_4.983740_g151625_i0 PRJNA315399 151826 160 4.98374 7.973984 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.004   NTclustered gi|116294932|gb|EF014343.1| 5908 g151625 i0 100 0.18125 29 0 18 0 2 30 102 74 Tetrahymena pyriformis RNase P gene, complete sequence blastn 29 54.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
7444267 7444267 PRJNA315399_P_NODE_77806_length_212_cov_7.971429_g77358_i0 PRJNA315399 77806 212 7.971429 16.89942948 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 163 8.25e-36   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g77358 i0 97.872 36.7547169811321 94 2 44 0 11 104 2922 3015 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 7792 163 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
8038247 8038247 PRJNA315399_S_NODE_25187_length_261_cov_4.964286_g24986_i0 PRJNA315399 25187 261 4.964286 12.95678646 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 385 2.07e-102   NTclustered gi|2072713056|gb|MH608212.2| 266149 g24986 i0 94.422 0.961685823754789 251 12 96 2 1 250 38657 38906 Pseudocohnilembus persalinus mitochondrion blastn 251 385 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
9310772 9310772 PRJNA315399_P_NODE_354528_length_168_cov_5.709924_g354080_i0 PRJNA315399 354528 168 5.709924 9.59267232 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.014   NTclustered gi|829176794|ref|XM_012798245.1| 312017 g354080 i0 96.774 0.18452380952381 31 1 18 0 89 119 3450 3420 Tetrahymena thermophila SB210 hypothetical protein mRNA blastn 31 52.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
9311455 9311455 PRJNA315399_P_NODE_460648_length_155_cov_3.220339_g460200_i0 PRJNA315399 460648 155 3.220339 4.99152545 Tetrahymena mimbres 5902 SAR_Eukaryotes SAR_Eukaryotes 100 4.49e-17   NTclustered gi|126142844|gb|EF070292.1| 5902 g460200 i0 81.061 42.5290322580645 132 19 83 5 15 143 1230 1102 Tetrahymena mimbres strain HS Cambridge cytochrome oxidase subunit I (cox1) gene, partial cds; mitochondrial blastn 6592 100 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena mimbres
9313490 9313490 PRJNA315399_S_NODE_6088_length_413_cov_15.579787_g5890_i0 PRJNA315399 6088 413 15.579787 64.34452031 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 628 1.4399999999999998e-175   NTclustered gi|2072713056|gb|MH608212.2| 266149 g5890 i0 95 33.1937046004843 400 20 97 0 5 404 24872 25271 Pseudocohnilembus persalinus mitochondrion blastn 13709 628 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
9994725 9994725 PRJNA315399_S_NODE_140168_length_164_cov_1.007874_g139967_i0 PRJNA315399 140168 164 1.007874 1.65291336 Vorticella 60849 SAR_Eukaryotes SAR_Eukaryotes 267 4.49e-67   NTclustered gi|512134943|gb|JX178902.1| 1295638 g139967 i0 96.296 99.1524390243902 162 6 99 0 1 162 1266 1105 Vorticella sp. 4 JG-2011 clone 2 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 16261 267 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 4 JG-2011
10588430 10588430 PRJNA315399_S_NODE_16489_length_298_cov_2.026820_g16288_i0 PRJNA315399 16489 298 2.02682 6.0399236 Paramecium tetraurelia 5888 SAR_Eukaryotes SAR_Eukaryotes 126 1.6099999999999997e-24   NTclustered gi|2386256733|ref|XM_001454351.2| 5888 g16288 i0 80.982 0.546979865771812 163 28 54 3 137 297 272 111 Paramecium tetraurelia uncharacterized protein (GSPATT00020655001), mRNA blastn 163 126 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
11270105 11270105 PRJNA315399_S_NODE_36369_length_234_cov_17.639594_g36168_i0 PRJNA315399 36369 234 17.639594 41.27664996 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 370 5.09e-98   NTclustered gi|2459327249|gb|OQ626843.1| 5908 g36168 i0 100 82.5683760683761 200 0 85 0 24 223 812 613 Tetrahymena pyriformis isolate LLH20220320 pop variant pop1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 19321 370 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
11864247 11864247 PRJNA315399_S_NODE_69370_length_196_cov_30.308176_g69169_i0 PRJNA315399 69370 196 30.308176 59.40402496 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 228 2.619999999999999e-55   NTclustered gi|2072713056|gb|MH608212.2| 266149 g69169 i0 93.038 3.27040816326531 158 8 80 3 4 159 37541 37385 Pseudocohnilembus persalinus mitochondrion blastn 641 228 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
12545343 12545343 PRJNA315399_S_NODE_32390_length_242_cov_97.956098_g32189_i0 PRJNA315399 32390 242 97.956098 237.05375716 root 1 Root_unresolved Root_unresolved 337 5.37e-88   NTclustered gi|10782|emb|X54004.1| 5908 g32189 i0 94.884 78.2396694214876 215 11 89 0 17 231 3161 2947 Tetrahymena pyriformis gene for 26S large subunit ribosomal RNA blastn 18934 337 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
13138475 13138475 PRJNA315399_S_NODE_17591_length_291_cov_17.641732_g17390_i0 PRJNA315399 17591 291 17.641732 51.33744012 Pseudocohnilembus hargisi 223571 SAR_Eukaryotes SAR_Eukaryotes 494 3.7299999999999996e-135   NTclustered gi|56418526|gb|AY833087.1| 223571 g17390 i0 97.569 98.7113402061856 288 7 99 0 4 291 1000 713 Pseudocohnilembus hargisi 18S ribosomal RNA gene, complete sequence blastn 28725 494 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus hargisi
14413238 14413238 PRJNA315399_S_NODE_12152_length_327_cov_311.306897_g11951_i0 PRJNA315399 12152 327 311.306897 1017.97355319 Pseudocohnilembus hargisi 223571 SAR_Eukaryotes SAR_Eukaryotes 503 7.06e-138   NTclustered gi|390988054|gb|JN885122.1| 223571 g11951 i0 97.306 93.2018348623853 297 7 91 1 9 304 1 297 Pseudocohnilembus hargisi isolate JJM2010031301 large subunit ribsomal RNA gene, partial sequence blastn 30477 503 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus hargisi
14413394 14413394 PRJNA315399_S_NODE_140652_length_163_cov_7.134921_g140451_i0 PRJNA315399 140652 163 7.134921 11.62992123 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 237 3.49e-58   NTclustered gi|1418575079|gb|MH577587.1| 266149 g140451 i0 94.737 20.1963190184049 152 8 93 0 1 152 393 242 Pseudocohnilembus persalinus isolate PXM10070301-1 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 3292 237 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
15687358 15687358 PRJNA315399_S_NODE_175513_length_155_cov_0.983051_g175312_i0 PRJNA315399 175513 155 0.983051 1.52372905 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.004   NTclustered gi|118383757|ref|XM_001025033.1| 312017 g175312 i0 100 0.187096774193548 29 0 19 0 60 88 1007 1035 Tetrahymena thermophila SB210 WD domain, G-beta repeat protein partial mRNA blastn 29 54.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
15687570 15687570 PRJNA315399_S_NODE_22773_length_269_cov_5.443966_g22572_i0 PRJNA315399 22773 269 5.443966 14.64426854 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 335 2.18e-87   NTclustered gi|2072713056|gb|MH608212.2| 266149 g22572 i0 92.05 0.888475836431227 239 17 88 2 21 258 38669 38906 Pseudocohnilembus persalinus mitochondrion blastn 239 335 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
16962550 16962550 PRJNA315399_S_NODE_35654_length_236_cov_2.994975_g35453_i0 PRJNA315399 35654 236 2.994975 7.068141 Miamiensis avidus 279580 SAR_Eukaryotes SAR_Eukaryotes 353 5.18e-93   NTclustered gi|1360785898|gb|MH064355.1| 279580 g35453 i0 93.991 86.2627118644068 233 14 99 0 1 233 1911 1679 Miamiensis avidus voucher 2017SHK large subunit ribosomal RNA gene, partial sequence blastn 20358 353 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Glauconematidae Miamiensis Miamiensis avidus
19511149 19511149 PRJNA315399_S_NODE_33836_length_239_cov_25.608911_g33635_i0 PRJNA315399 33836 239 25.608911 61.20529729 Opisthonecta sp. FG-2015 1607889 SAR_Eukaryotes SAR_Eukaryotes 368 1.88e-97   NTclustered gi|759083562|gb|KM222179.1| 1607889 g33635 i0 98.565 86.2761506276151 209 2 87 1 6 214 172 379 Opisthonecta sp. FG-2015 voucher SZ2011052301 large subunit ribosomal RNA gene, partial sequence blastn 20620 368 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Opisthonectidae Opisthonecta Opisthonecta sp. FG-2015
20785765 20785765 PRJNA315399_S_NODE_122017_length_169_cov_7.492424_g121816_i0 PRJNA315399 122017 169 7.492424 12.66219656 Opercularia sp. ZhW-2019a 2582953 SAR_Eukaryotes SAR_Eukaryotes 257 2.79e-64   NTclustered gi|2304601486|gb|OP458307.1| 2582953 g121816 i0 96.753 4.19526627218935 154 5 91 0 16 169 378 531 Opercularia sp. ZhW-2019a large subunit ribosomal RNA gene, partial sequence blastn 709 257 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Operculariidae Opercularia Opercularia sp. ZhW-2019a
22059563 22059563 PRJNA315399_P_NODE_40998_length_250_cov_8.004695_g40551_i0 PRJNA315399 40998 250 8.004695 20.0117375 Opercularia sp. ZhW-2019a 2582953 SAR_Eukaryotes SAR_Eukaryotes 248 2.69e-61   NTclustered gi|2304601486|gb|OP458307.1| 2582953 g40551 i0 98.571 63.1 140 2 56 0 8 147 415 276 Opercularia sp. ZhW-2019a large subunit ribosomal RNA gene, partial sequence blastn 15775 248 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Operculariidae Opercularia Opercularia sp. ZhW-2019a
22062156 22062156 PRJNA315399_S_NODE_79458_length_189_cov_9.756579_g79257_i0 PRJNA315399 79458 189 9.756579 18.43993431 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 248 1.93e-61   NTclustered gi|2072713056|gb|MH608212.2| 266149 g79257 i0 91.667 2.87830687830688 180 14 95 1 1 179 37282 37103 Pseudocohnilembus persalinus mitochondrion blastn 544 248 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
23336146 23336146 PRJNA315399_S_NODE_104139_length_176_cov_8.733813_g103938_i0 PRJNA315399 104139 176 8.733813 15.37151088 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 296 6.21e-76   NTclustered gi|2072713056|gb|MH608212.2| 266149 g103938 i0 99.39 89.0284090909091 164 0 93 1 14 176 38208 38371 Pseudocohnilembus persalinus mitochondrion blastn 15669 296 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
24608468 24608468 PRJNA315399_P_NODE_281620_length_179_cov_23.070423_g281172_i0 PRJNA315399 281620 179 23.070423 41.29605717 Vorticella sp. 4 JG-2011 1295638 SAR_Eukaryotes SAR_Eukaryotes 122 1.1399999999999999e-23   NTclustered gi|512134972|gb|JX178931.1| 1295638 g281172 i0 96.053 76.7932960893855 76 2 89 1 5 80 984 1058 Vorticella sp. 4 JG-2011 clone 31 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 13746 122 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticella Vorticella sp. 4 JG-2011
24611003 24611003 PRJNA315399_S_NODE_185000_length_152_cov_25.643478_g184799_i0 PRJNA315399 185000 152 25.643478000000002 38.97808656 Pseudocohnilembus hargisi 223571 SAR_Eukaryotes SAR_Eukaryotes 278 1.88e-70   NTclustered gi|28974303|gb|AY212806.1| 223571 g184799 i0 100 98.0328947368421 150 0 99 0 1 150 740 591 Pseudocohnilembus hargisi 16S small subunit ribosomal RNA gene, partial sequence blastn 14901 278 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus hargisi
24611143 24611143 PRJNA315399_S_NODE_21440_length_274_cov_3.974684_g21239_i0 PRJNA315399 21440 274 3.974684 10.89063416 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 359 1.32e-94   NTclustered gi|2072713056|gb|MH608212.2| 266149 g21239 i0 92.49 30.7080291970803 253 16 92 3 19 269 36581 36330 Pseudocohnilembus persalinus mitochondrion blastn 8414 359 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;