contig_metadata
16 rows where analysis = "blastn", bioproject = "PRJNA315399" and tax_phylum = "Acidobacteriota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 384580 | 384580 | PRJNA315399_S_NODE_15501_length_303_cov_6.755639_g15300_i0 | PRJNA315399 | 15501 | 303 | 6.755639 | 20.46958617 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 355 | 1.92e-93 | NTclustered | gi|76574297|gb|DQ139445.1| | 171953 | g15300 | i0 | 90.977 | 112.838283828383 | 266 | 20 | 87 | 4 | 6 | 268 | 13 | 277 | Uncultured Acidobacteria bacterium clone CAL4 23S ribosomal RNA gene, partial sequence | blastn | 34190 | 355 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 1658062 | 1658062 | PRJNA315399_P_NODE_454942_length_155_cov_12.288136_g454494_i0 | PRJNA315399 | 454942 | 155 | 12.288136 | 19.0466108 | uncultured Acidobacteriaceae bacterium | 194844 | Bacteria | Bacteria | 84.2 | 4.52e-12 | NTclustered | gi|2874253750|emb|OY969625.1| | 194844 | g454494 | i0 | 82.178 | 0.651612903225806 | 101 | 15 | 64 | 3 | 4 | 102 | 4217651 | 4217552 | MAG: uncultured Acidobacteriaceae bacterium isolate MFD09495.bin.1.66 genome assembly, chromosome: 1 | blastn | 101 | 84.2 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | uncultured Acidobacteriaceae bacterium | |||
| 4211379 | 4211379 | PRJNA315399_S_NODE_101604_length_178_cov_1.489362_g101403_i0 | PRJNA315399 | 101604 | 178 | 1.489362 | 2.65106436 | Luteitalea pratensis | 1855912 | Bacteria | Bacteria | 291 | 2.93e-74 | NTclustered | gi|1016914409|gb|CP015136.1| | 1855912 | g101403 | i0 | 96.067 | 2.07865168539326 | 178 | 7 | 100 | 0 | 1 | 178 | 5847976 | 5847799 | Luteitalea pratensis strain DSM 100886 chromosome, complete genome | blastn | 370 | 291 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacteraceae | Luteitalea | Luteitalea pratensis | ||
| 4211963 | 4211963 | PRJNA315399_S_NODE_171684_length_155_cov_6.737288_g171483_i0 | PRJNA315399 | 171684 | 155 | 6.737288 | 10.4427964 | uncultured Acidobacteriaceae bacterium | 194844 | Bacteria | Bacteria | 180 | 5.599999999999998e-41 | NTclustered | gi|2874253852|emb|OY969908.1| | 194844 | g171483 | i0 | 87.662 | 26.5870967741935 | 154 | 19 | 99 | 0 | 1 | 154 | 2169550 | 2169397 | MAG: uncultured Acidobacteriaceae bacterium isolate MFD09286.bin.1.44 genome assembly, chromosome: 1 | blastn | 4121 | 180 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | uncultured Acidobacteriaceae bacterium | |||
| 5487668 | 5487668 | PRJNA315399_P_NODE_90445_length_205_cov_15.321429_g89997_i0 | PRJNA315399 | 90445 | 205 | 15.321429 | 31.40892945 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 126 | 1.04e-24 | NTclustered | gi|2874253885|emb|OY970060.1| | 171953 | g89997 | i0 | 96.104 | 19.1170731707317 | 77 | 3 | 38 | 0 | 113 | 189 | 4839154 | 4839078 | MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.4 genome assembly, chromosome: 1 | blastn | 3919 | 126 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 5489321 | 5489321 | PRJNA315399_S_NODE_85365_length_186_cov_2.912752_g85164_i0 | PRJNA315399 | 85365 | 186 | 2.912752 | 5.41771872 | Luteitalea sp. TBR-22 | 2802971 | Bacteria | Bacteria | 180 | 6.99e-41 | NTclustered | gi|2131947417|dbj|AP024452.2| | 2802971 | g85164 | i0 | 88.079 | 0.811827956989247 | 151 | 18 | 81 | 0 | 2 | 152 | 3281646 | 3281496 | Vicinamibacteria bacterium TBR-22 DNA, complete genome | blastn | 151 | 180 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacteraceae | Luteitalea | Luteitalea sp. TBR-22 | ||
| 5489346 | 5489346 | PRJNA315399_S_NODE_87785_length_184_cov_44.455782_g87584_i0 | PRJNA315399 | 87785 | 184 | 44.455782 | 81.79863888 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 202 | 1.47e-47 | NTclustered | gi|1958093598|gb|CP065003.1| | 1978231 | g87584 | i0 | 94.615 | 25.625 | 130 | 7 | 71 | 0 | 16 | 145 | 317252 | 317381 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.185_cln chromosome, complete genome | blastn | 4715 | 202 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 9995062 | 9995062 | PRJNA315399_S_NODE_48548_length_216_cov_6.256983_g48347_i0 | PRJNA315399 | 48548 | 216 | 6.256983 | 13.51508328 | Bacteria | 2 | Bacteria | Bacteria | 305 | 1.33e-78 | NTclustered | gi|31789464|gb|AY281356.1| | 171953 | g48347 | i0 | 93.269 | 271.699074074074 | 208 | 13 | 96 | 1 | 1 | 207 | 9263 | 9470 | Uncultured Acidobacteria bacterium clone 41b15 genomic sequence | blastn | 58687 | 305 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 10588413 | 10588413 | PRJNA315399_S_NODE_162869_length_157_cov_8.758333_g162668_i0 | PRJNA315399 | 162869 | 157 | 8.758333 | 13.75058281 | Candidatus Acidiferrales bacterium | 2952895 | Bacteria | Bacteria | 174 | 2.65e-39 | NTclustered | gi|2874253786|emb|OY969770.1| | 2952895 | g162668 | i0 | 90.769 | 119.216560509554 | 130 | 12 | 83 | 0 | 14 | 143 | 3515720 | 3515849 | MAG: Candidatus Acidoferrales bacterium isolate MFD09222.bin.1.52 genome assembly, chromosome: 1 | blastn | 18717 | 174 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Candidatus Acidiferrales | Candidatus Acidiferrales bacterium | ||||
| 10589401 | 10589401 | PRJNA315399_S_NODE_71849_length_195_cov_1.493671_g71648_i0 | PRJNA315399 | 71849 | 195 | 1.493671 | 2.91265845 | Luteitalea pratensis | 1855912 | Bacteria | Bacteria | 268 | 1.5399999999999998e-67 | NTclustered | gi|1016914409|gb|CP015136.1| | 1855912 | g71648 | i0 | 92.105 | 0.974358974358974 | 190 | 15 | 97 | 0 | 1 | 190 | 870792 | 870603 | Luteitalea pratensis strain DSM 100886 chromosome, complete genome | blastn | 190 | 268 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacteraceae | Luteitalea | Luteitalea pratensis | ||
| 11862230 | 11862230 | PRJNA315399_P_NODE_488690_length_152_cov_4.104348_g488242_i0 | PRJNA315399 | 488690 | 152 | 4.104348 | 6.23860896 | Thermoanaerobaculia bacterium | 2651171 | Bacteria | Bacteria | 54.7 | 0.003 | NTclustered | gi|2893356059|emb|OZ220482.1| | 2651171 | g488242 | i0 | 96.875 | 0.210526315789474 | 32 | 1 | 21 | 0 | 2 | 33 | 1135942 | 1135973 | MAG: Thermoanaerobaculia bacterium isolate 1ba308f5-42e2-4878-81ff-2dc7ade272f8 genome assembly, chromosome: 1 | blastn | 32 | 54.7 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Thermoanaerobaculia | Thermoanaerobaculia bacterium | |||||
| 13819000 | 13819000 | PRJNA315399_P_NODE_18331_length_301_cov_22.727273_g17888_i0 | PRJNA315399 | 18331 | 301 | 22.727273 | 68.40909173 | Acidobacteriota | 57723 | Bacteria | Bacteria | 147 | 1.25e-30 | NTclustered | gi|470484216|ref|NR_076636.1| | 33075 | g17888 | i0 | 93.878 | 37.6810631229236 | 98 | 4 | 32 | 2 | 14 | 110 | 1 | 97 | Acidobacterium capsulatum strain 161 23S ribosomal RNA gene, complete sequence | blastn | 11342 | 147 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Acidobacterium | Acidobacterium capsulatum | ||
| 14411156 | 14411156 | PRJNA315399_P_NODE_266852_length_180_cov_9.818182_g266404_i0 | PRJNA315399 | 266852 | 180 | 9.818182 | 17.6727276 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 60.2 | 9.13e-5 | NTclustered | gi|2874253885|emb|OY970060.1| | 171953 | g266404 | i0 | 92.683 | 0.227777777777778 | 41 | 3 | 23 | 0 | 23 | 63 | 1861706 | 1861666 | MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.4 genome assembly, chromosome: 1 | blastn | 41 | 60.2 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 14411893 | 14411893 | PRJNA315399_P_NODE_387892_length_163_cov_2.976190_g387444_i0 | PRJNA315399 | 387892 | 163 | 2.97619 | 4.8511897 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 99 | 1.72e-16 | NTclustered | gi|2874253710|emb|OY969475.1| | 2283092 | g387444 | i0 | 90.541 | 0.828220858895706 | 74 | 7 | 45 | 0 | 75 | 148 | 2109570 | 2109643 | MAG: Pyrinomonadaceae bacterium isolate MFD01916.bin.c.1 genome assembly, chromosome: 1 | blastn | 135 | 99 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 20783659 | 20783659 | PRJNA315399_P_NODE_266157_length_180_cov_13.566434_g265709_i0 | PRJNA315399 | 266157 | 180 | 13.566434 | 24.4195812 | uncultured Acidobacteriota bacterium | 171953 | Bacteria | Bacteria | 119 | 1.48e-22 | NTclustered | gi|2874253885|emb|OY970060.1| | 171953 | g265709 | i0 | 95.89 | 19.5888888888889 | 73 | 3 | 41 | 0 | 90 | 162 | 4839151 | 4839079 | MAG: uncultured Acidobacteriota bacterium isolate MFD01916.bin.c.4 genome assembly, chromosome: 1 | blastn | 3526 | 119 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | uncultured Acidobacteriota bacterium | ||||||
| 23336685 | 23336685 | PRJNA315399_S_NODE_168299_length_156_cov_4.168067_g168098_i0 | PRJNA315399 | 168299 | 156 | 4.168067 | 6.50218452 | Edaphobacter paludis | 3035702 | Bacteria | Bacteria | 99 | 1.63e-16 | NTclustered | gi|2737763816|gb|CP121194.1| | 3035702 | g168098 | i0 | 79.433 | 1.80769230769231 | 141 | 27 | 90 | 2 | 12 | 151 | 160955 | 160816 | Edaphobacter paludis strain DSM 109919 chromosome, complete genome | blastn | 282 | 99 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Edaphobacter | Edaphobacter paludis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;