RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA315314" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA315314 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2340622 2340622 PRJNA315314_S_NODE_4982_length_359_cov_31.236364_g4661_i0 PRJNA315314 4982 359 31.236364 112.13854676 Fungi 4751 Fungi Fungi 213 1.47e-50   NTclustered gi|82398545|gb|DQ273809.1| 61424 g4661 i0 100 50.0974930362117 115 0 32 0 245 359 2256 2370 Furculomyces boomerangus isolate AFTOL-ID 303 28S ribosomal RNA gene, partial sequence blastn 17985 215 0.990697674418605 Eukaryota Opisthokonta Fungi Zoopagomycota Harpellomycetes Harpellales Harpellaceae Furculomyces Furculomyces boomerangus
6758334 6758334 PRJNA315314_S_NODE_12546_length_229_cov_23.380000_g12225_i0 PRJNA315314 12546 229 23.38 53.5402 Basidiobolus ranarum 34480 Fungi Fungi 261 3.12e-65   NTclustered gi|82398540|gb|DQ273807.1| 34480 g12225 i0 87.179 100.078602620087 234 24 100 4 1 229 2807 2575 Basidiobolus ranarum isolate AFTOL-ID 301 28S ribosomal RNA gene, partial sequence blastn 22918 261 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus ranarum
8034342 8034342 PRJNA315314_S_NODE_8067_length_284_cov_14.290196_g7746_i0 PRJNA315314 8067 284 14.290196 40.58415664 Piptocephalis corymbifera 78917 Fungi Fungi 75 5.6e-9   NTclustered gi|311235601|ref|NG_027616.1| 78917 g7746 i0 87.692 0.633802816901408 65 7 23 1 160 223 3234 3170 Piptocephalis corymbifera NRRL 2385 28S rRNA gene, partial sequence; from reference material blastn 180 75 1 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Piptocephalidaceae Piptocephalis Piptocephalis corymbifera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;