RNAquarium Metadata Server
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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA315314" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 9 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA315314 · 9 ✖

analysis 1

  • blastn · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
380671 380671 PRJNA315314_S_NODE_12541_length_229_cov_61.230000_g12220_i0 PRJNA315314 12541 229 61.23 140.2167 Adineta vaga 104782 Rotifera other_Eukaryota 193 1.15e-44   NTclustered gi|37788192|gb|AY218145.1| 104782 g12220 i0 91.034 59.1703056768559 145 9 62 4 2 144 302 160 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 13550 193 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
2931594 2931594 PRJNA315314_S_NODE_3183_length_446_cov_74.541966_g2863_i0 PRJNA315314 3183 446 74.541966 332.45716836 Adineta vaga 104782 Rotifera other_Eukaryota 793 0   NTclustered gi|259129963|gb|GQ398061.1| 104782 g2863 i0 98.874 80.3766816143498 444 5 99 0 3 446 4595 4152 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 35848 793 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
6168107 6168107 PRJNA315314_S_NODE_19585_length_186_cov_51.426752_g19264_i0 PRJNA315314 19585 186 51.426752 95.65375872 Metazoa 33208 Rotifera other_Eukaryota 344 2.34e-90   NTclustered gi|37785582|gb|AY210469.1| 96448 g19264 i0 100 103.327956989247 186 0 100 0 1 186 1373 1188 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 19219 344 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
7443156 7443156 PRJNA315314_S_NODE_15406_length_208_cov_64.916201_g15085_i0 PRJNA315314 15406 208 64.916201 135.02569808 Metazoa 33208 Rotifera other_Eukaryota 383 5.69e-102   NTclustered gi|37785582|gb|AY210469.1| 96448 g15085 i0 100 98.7451923076923 207 0 99 0 2 208 3151 2945 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 20539 383 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
10584828 10584828 PRJNA315314_S_NODE_3709_length_415_cov_61.489637_g3388_i0 PRJNA315314 3709 415 61.489637 255.18199355 Adineta vaga 104782 Rotifera other_Eukaryota 686 0   NTclustered gi|259129963|gb|GQ398061.1| 104782 g3388 i0 98.705 4.58313253012048 386 5 93 0 1 386 10013 10398 Adineta vaga 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 1902 686 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
13818704 13818704 PRJNA315314_S_NODE_21311_length_179_cov_21.800000_g20990_i0 PRJNA315314 21311 179 21.8 39.022 Eurotatoria 2816136 Rotifera other_Eukaryota 283 4.94e-72   NTclustered gi|57282209|emb|AJ487047.1| 195509 g20990 i0 95.055 101.675977653631 182 5 100 4 1 179 684 864 Floscularia decora 18S rRNA gene blastn 18200 283 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Flosculariaceae Flosculariidae Floscularia Floscularia decora
15683298 15683298 PRJNA315314_S_NODE_12013_length_234_cov_32.624390_g11692_i0 PRJNA315314 12013 234 32.62439 76.3410726 Adineta vaga 104782 Rotifera other_Eukaryota 411 3e-110   NTclustered gi|72153731|gb|DQ089739.1| 104782 g11692 i0 98.291 27.0384615384615 234 4 100 0 1 234 2390 2623 Adineta vaga 28S ribosomal RNA gene, partial sequence blastn 6327 411 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta vaga
16367943 16367943 PRJNA315314_S_NODE_533_length_1031_cov_81.878244_g403_i0 PRJNA315314 533 1031 81.878244 844.16469564 Eurotatoria 2816136 Rotifera other_Eukaryota 1749 0   NTclustered gi|72153762|gb|DQ089743.1| 231624 g403 i0 97.3 35.0436469447139 1037 17 99 8 4 1031 2187 1153 Rotaria rotatoria 28S ribosomal RNA gene, partial sequence blastn 36130 1764 0.991496598639456 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria rotatoria
23332873 23332873 PRJNA315314_S_NODE_23979_length_170_cov_34.212766_g23658_i0 PRJNA315314 23979 170 34.212766 58.1617022 Lecanidae environmental sample 662389 Rotifera other_Eukaryota 257 2.81e-64   NTclustered gi|255760339|gb|GQ371121.1| 662389 g23658 i0 94.611 98.3411764705882 167 8 98 1 1 167 191 26 Lecanidae environmental sample clone Lacanidae2 18S ribosomal RNA gene, partial sequence blastn 16718 257 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Lecanidae   Lecanidae environmental sample

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;