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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA315314" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA315314 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1655755 1655755 PRJNA315314_S_NODE_32202_length_150_cov_15.264463_g31881_i0 PRJNA315314 32202 150 15.264463 22.8966945 Pseudoloma neurophilia 146866 Fungi Fungi 276 6.660000000000001e-70   NTclustered gi|11993647|gb|AF322654.1| 146866 g31881 i0 100 54.94 149 0 99 0 2 150 289 141 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 8241 276 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
4208239 4208239 PRJNA315314_S_NODE_5624_length_339_cov_7.596774_g5303_i0 PRJNA315314 5624 339 7.596774 25.75306386 Heterosporis sp. NBDP-2013a 1289055 Fungi Fungi 97.1 1.46e-15   NTclustered gi|448278458|gb|KC137554.1| 1289055 g5303 i0 82.727 0.324483775811209 110 18 32 1 171 280 2854 2962 Heterosporis sp. NBDP-2013a isolate MN/CISCO small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 110 97.1 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Heterosporis Heterosporis sp. NBDP-2013a
6758290 6758290 PRJNA315314_S_NODE_10466_length_250_cov_5.343891_g10145_i0 PRJNA315314 10466 250 5.343891 13.3597275 Heterosporis sp. NBDP-2013a 1289055 Fungi Fungi 75 4.83e-9   NTclustered gi|448278458|gb|KC137554.1| 1289055 g10145 i0 95.652 0.184 46 2 18 0 60 105 2962 2917 Heterosporis sp. NBDP-2013a isolate MN/CISCO small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 46 75 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Heterosporis Heterosporis sp. NBDP-2013a
10584788 10584788 PRJNA315314_S_NODE_3029_length_455_cov_16.591549_g2711_i0 PRJNA315314 3029 455 16.591549 75.49154795 Pseudoloma neurophilia 146866 Fungi Fungi 837 0   NTclustered gi|11993647|gb|AF322654.1| 146866 g2711 i0 100 98.2131868131868 453 0 99 0 3 455 1335 883 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 44687 837 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
11859554 11859554 PRJNA315314_S_NODE_26210_length_164_cov_2.296296_g25889_i0 PRJNA315314 26210 164 2.296296 3.76592544 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 263 5.809999999999999e-66   NTclustered gi|2522768008|gb|OR162445.1| 646526 g25889 i0 97.403 42.4207317073171 154 4 94 0 11 164 3432 3279 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 6957 263 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
23332768 23332768 PRJNA315314_S_NODE_1779_length_582_cov_20.849910_g1509_i0 PRJNA315314 1779 582 20.84991 121.3464762 Pseudoloma neurophilia 146866 Fungi Fungi 1061 0   NTclustered gi|11993647|gb|AF322654.1| 146866 g1509 i0 99.485 99.3883161512027 582 3 100 0 1 582 281 862 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 57844 1061 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;