RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA315314" and tax_phylum = "Lenarviricota"

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tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA315314 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20782370 20782370 PRJNA315314_S_NODE_23717_length_171_cov_6.267606_g23396_i0 PRJNA315314 23717 171 6.267606 10.71760626 Sopafab virus 3131770 Viruses Viruses 119 1.39e-22   NTclustered gi|2717323354|gb|PP174071.1| 3131770 g23396 i0 79.891 46.6432748538012 184 20 98 11 4 171 310 128 MAG: Sopafab virus isolate SP1C_k141_220867 genomic sequence blastn 7976 119 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Sopafab virus
22057559 22057559 PRJNA315314_S_NODE_7498_length_294_cov_37.449057_g7177_i0 PRJNA315314 7498 294 37.449057 110.10022758 Chrocagost virus 3129398 Viruses Viruses 244 4.1899999999999996e-60   NTclustered gi|2717317482|gb|PP171846.1| 3129398 g7177 i0 88.235 156.666666666667 204 24 69 0 7 210 5659 5862 MAG: Chrocagost virus isolate CC1A_k141_84256 genomic sequence blastn 46060 244 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Chrocagost virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;