RNAquarium Metadata Server
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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA315314" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 13 ✖

tax_clade 1

bioproject 1

  • PRJNA315314 · 13 ✖

analysis 1

  • blastn · 13 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1655402 1655402 PRJNA315314_S_NODE_10782_length_247_cov_1.266055_g10461_i0 PRJNA315314 10782 247 1.266055 3.12715585 Heterostelium album 2086695 Evosea other_Eukaryota 75 4.76e-9   NTclustered gi|1160566874|ref|XM_020581062.1| 670386 g10461 i0 97.674 0.356275303643725 43 1 17 0 60 102 388 430 Polysphondylium pallidum PN500 S60 ribosomal protein L17 (rpl17), partial mRNA blastn 88 75 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
2931371 2931371 PRJNA315314_S_NODE_1683_length_599_cov_9.396491_g1417_i0 PRJNA315314 1683 599 9.396491 56.28498109 Endolimax piscium 1284676 Evosea other_Eukaryota 795 0   NTclustered gi|443299289|gb|JX101954.1| 1284676 g1417 i0 90.64 24.7829716193656 609 42 100 14 1 599 1790 1187 Endolimax piscium clone PM1 18S ribosomal RNA gene, partial sequence blastn 14845 795 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Endolimax Endolimax piscium
4893216 4893216 PRJNA315314_S_NODE_4424_length_380_cov_61.470085_g4103_i0 PRJNA315314 4424 380 61.470085 233.586323 Flamella 490353 Evosea other_Eukaryota 446 1.42e-120   NTclustered gi|163943979|gb|EU186023.1| 490516 g4103 i0 99.19 91.9131578947368 247 2 81 0 1 247 767 1013 Flamella balnearia 18S ribosomal RNA gene, partial sequence blastn 34927 446 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Flamella Flamella balnearia
6758449 6758449 PRJNA315314_S_NODE_19306_length_188_cov_1.943396_g18985_i0 PRJNA315314 19306 188 1.943396 3.65358448 Entamoeba invadens 33085 Evosea other_Eukaryota 52.8 0.016   NTclustered gi|471206948|ref|XM_004260179.1| 370355 g18985 i0 100 0.148936170212766 28 0 15 0 85 112 676 703 Entamoeba invadens IP1 hypothetical protein (EIN_059410) mRNA, complete cds blastn 28 52.8 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
8717818 8717818 PRJNA315314_S_NODE_11907_length_235_cov_44.359223_g11586_i0 PRJNA315314 11907 235 44.359223 104.24417405 Flamella 490353 Evosea other_Eukaryota 429 8.33e-116   NTclustered gi|163943979|gb|EU186023.1| 490516 g11586 i0 99.574 98.7659574468085 235 1 100 0 1 235 767 1001 Flamella balnearia 18S ribosomal RNA gene, partial sequence blastn 23210 429 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Flamella Flamella balnearia
9993494 9993494 PRJNA315314_S_NODE_3648_length_418_cov_19.334190_g3328_i0 PRJNA315314 3648 418 19.33419 80.8169142 Flamella 490353 Evosea other_Eukaryota 449 1.2199999999999999e-121   NTclustered gi|163943979|gb|EU186023.1| 490516 g3328 i0 98.438 61.3875598086124 256 3 61 1 164 418 725 980 Flamella balnearia 18S ribosomal RNA gene, partial sequence blastn 25660 449 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Flamella Flamella balnearia
11859689 11859689 PRJNA315314_S_NODE_5310_length_348_cov_6.347962_g4989_i0 PRJNA315314 5310 348 6.347962 22.09090776 Cavenderia fasciculata 261658 Evosea other_Eukaryota 93.5 1.94e-14   NTclustered gi|470266378|ref|XM_004361682.1| 261658 g4989 i0 83.019 1.43965517241379 106 14 30 4 152 255 623 520 Cavenderia fasciculata 40S ribosomal protein S8 (rps8), partial mRNA blastn 501 93.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
13134598 13134598 PRJNA315314_S_NODE_2591_length_493_cov_6.491379_g2282_i0 PRJNA315314 2591 493 6.491379 32.00249847 Endolimax piscium 1284676 Evosea other_Eukaryota 579 1.7899999999999993e-160   NTclustered gi|443299289|gb|JX101954.1| 1284676 g2282 i0 87.767 4.16632860040568 515 38 100 22 1 493 155 666 Endolimax piscium clone PM1 18S ribosomal RNA gene, partial sequence blastn 2054 579 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Endolimax Endolimax piscium
14409768 14409768 PRJNA315314_S_NODE_24912_length_168_cov_1.625899_g24591_i0 PRJNA315314 24912 168 1.625899 2.73151032 Acytostelium subglobosum 361139 Evosea other_Eukaryota 84.2 5e-12   NTclustered gi|831770523|ref|XM_012897573.1| 1410327 g24591 i0 91.667 0.69047619047619 60 5 36 0 29 88 434 375 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 116 84.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
21467146 21467146 PRJNA315314_S_NODE_4137_length_393_cov_21.851648_g3816_i0 PRJNA315314 4137 393 21.851648 85.87697664 Flamella 490353 Evosea other_Eukaryota 721 0   NTclustered gi|163943979|gb|EU186023.1| 490516 g3816 i0 99.746 74.8702290076336 393 1 100 0 1 393 588 980 Flamella balnearia 18S ribosomal RNA gene, partial sequence blastn 29424 721 1 Eukaryota Amoebozoa   Evosea Variosea   Flamellidae Flamella Flamella balnearia
22057142 22057142 PRJNA315314_S_NODE_12938_length_226_cov_4.756345_g12617_i0 PRJNA315314 12938 226 4.756345 10.7493397 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 165 2.48e-36   NTclustered gi|354683898|gb|JN048925.1| 361077 g12617 i0 81.281 7.95132743362832 203 38 90 0 9 211 1165 963 Tieghemostelium lacteum cell division cycle protein 48 gene, complete cds blastn 1797 165 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
22057388 22057388 PRJNA315314_S_NODE_27178_length_161_cov_7.795455_g26857_i0 PRJNA315314 27178 161 7.795455 12.55068255 Mastigamoeba balamuthi 108607 Evosea other_Eukaryota 97.1 6.09e-16   NTclustered gi|19911164|dbj|AB066364.1| 108607 g26857 i0 98.182 8.6583850931677 55 1 34 0 1 55 1647 1701 Mastigamoeba balamuthi gene for LSU rRNA, partial sequence, clone:MbR2 blastn 1394 97.1 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Mastigamoebidae Mastigamoeba Mastigamoeba balamuthi
24607117 24607117 PRJNA315314_S_NODE_5080_length_356_cov_6.633028_g4759_i0 PRJNA315314 5080 356 6.633028 23.61357968 Heterostelium album 2086695 Evosea other_Eukaryota 283 1.1e-71   NTclustered gi|1160553732|ref|XM_020572691.1| 670386 g4759 i0 81.232 98.6179775280899 357 61 99 6 1 354 718 1071 Polysphondylium pallidum PN500 elongation factor 1 alpha (efaAI), partial mRNA blastn 35108 283 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;