RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA315314" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA315314 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4208089 4208089 PRJNA315314_S_NODE_27064_length_162_cov_1.541353_g26743_i0 PRJNA315314 27064 162 1.541353 2.49699186 Diadema antillarum 105358 Echinodermata other_Eukaryota 63.9 6.23e-6   NTclustered gi|2919450108|ref|XM_071640649.1| 105358 g26743 i0 93.182 2.08024691358025 44 2 27 1 2 44 638 595 PREDICTED: Diadema antillarum cytoskeleton-associated protein 5-like (LOC139729720), mRNA blastn 337 63.9 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum
14409841 14409841 PRJNA315314_S_NODE_30652_length_153_cov_22.782258_g30331_i0 PRJNA315314 30652 153 22.782258 34.85685474 Myriotrochus sp. AKM-2016 1902928 Echinodermata other_Eukaryota 183 4.259999999999999e-42   NTclustered gi|1160550711|gb|KX856867.1| 1902928 g30331 i0 88.235 99.9869281045752 153 18 100 0 1 153 563 411 Myriotrochus sp. AKM-2016 voucher NIWA:37812 28S ribosomal RNA gene, partial sequence blastn 15298 183 1 Eukaryota Opisthokonta Metazoa Echinodermata Holothuroidea Apodida Myriotrochidae Myriotrochus Myriotrochus sp. AKM-2016

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;