RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA315314" and tax_phylum = "Candidatus Aminicenantota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Aminicenantota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA315314 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13134630 13134630 PRJNA315314_S_NODE_27931_length_159_cov_9.830769_g27610_i0 PRJNA315314 27931 159 9.830769 15.63092271 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 178 2.08e-40   NTclustered gi|2874253936|emb|OY970261.1| 2052149 g27610 i0 86.875 146.735849056604 160 19 100 2 1 159 3246830 3246988 MAG: Candidatus Aminicenantes bacterium isolate MFD04408.bin.1.29 genome assembly, chromosome: 1 blastn 23331 178 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
22057486 22057486 PRJNA315314_S_NODE_4578_length_374_cov_6.837681_g4257_i0 PRJNA315314 4578 374 6.837681 25.57292694 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 169 3.3899999999999996e-37   NTclustered gi|2874254063|emb|OY970122.1| 2052149 g4257 i0 77.815 114.812834224599 302 47 77 18 1 288 2275286 2274991 MAG: Candidatus Aminicenantes bacterium isolate MFD04408.bin.1.13 genome assembly, chromosome: 1 blastn 42940 169 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;