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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA315314" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA315314 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
380807 380807 PRJNA315314_S_NODE_20061_length_184_cov_10.393548_g19740_i0 PRJNA315314 20061 184 10.393548 19.12412832 Urospora ovalis 1852269 SAR_Eukaryotes SAR_Eukaryotes 63.9 7.25e-6   NTclustered gi|2574881051|gb|OR529005.1| 1852269 g19740 i0 95.122 16.4565217391304 41 1 22 1 145 184 476 516 Urospora ovalis isolate WSBS large subunit ribosomal RNA gene, partial sequence blastn 3028 63.9 1 Eukaryota Sar   Apicomplexa Conoidasida Eugregarinorida Urosporidae Urospora Urospora ovalis
1065268 1065268 PRJNA315314_S_NODE_13681_length_220_cov_3512.675393_g13360_i0 PRJNA315314 13681 220 3512.675393 7727.8858646 root 1 Root_unresolved Root_unresolved 71.3 5.38e-8   NTclustered gi|916497858|ref|XM_013494305.1| 44415 g13360 i0 95.556 18.8454545454545 45 0 20 2 176 220 422 380 Eimeria mitis uncharacterized protein (EMH_0029470), partial mRNA blastn 4146 71.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
4893224 4893224 PRJNA315314_S_NODE_604_length_970_cov_748.426142_g461_i0 PRJNA315314 604 970 748.426142 7259.7335774 root 1 Root_unresolved Root_unresolved 69.4 9.75e-7   NTclustered gi|916497858|ref|XM_013494305.1| 44415 g461 i0 93.617 4.1 47 1 5 2 1 46 380 425 Eimeria mitis uncharacterized protein (EMH_0029470), partial mRNA blastn 3977 69.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
6758519 6758519 PRJNA315314_S_NODE_24126_length_170_cov_2.588652_g23805_i0 PRJNA315314 24126 170 2.588652 4.4007084 Theileria orientalis 68886 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.004   NTclustered gi|697889572|ref|XR_696405.1| 869250 g23805 i0 96.97 0.523529411764706 33 0 19 1 1 32 3109 3141 Theileria orientalis strain Shintoku 28S ribosomal RNA rRNA blastn 89 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria orientalis
15092966 15092966 PRJNA315314_S_NODE_14632_length_213_cov_3667.831522_g14311_i0 PRJNA315314 14632 213 3667.831522 7812.48114186 root 1 Root_unresolved Root_unresolved 71.3 5.17e-8   NTclustered gi|916497858|ref|XM_013494305.1| 44415 g14311 i0 95.455 19.4929577464789 44 2 21 0 170 213 423 380 Eimeria mitis uncharacterized protein (EMH_0029470), partial mRNA blastn 4152 71.3 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
15683345 15683345 PRJNA315314_S_NODE_14653_length_213_cov_12.532609_g14332_i0 PRJNA315314 14653 213 12.532609 26.69445717 Toxoplasma gondii 5811 SAR_Eukaryotes SAR_Eukaryotes 58.4 4.03e-4   NTclustered gi|820698945|tpe|LN714498.1| 432359 g14332 i0 85.714 1.91079812206573 56 6 26 2 89 143 2293465 2293519 TPA_asm: Toxoplasma gondii VEG, chromosome chrVIII, complete genome blastn 407 58.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
20782284 20782284 PRJNA315314_S_NODE_18617_length_191_cov_2.506173_g18296_i0 PRJNA315314 18617 191 2.506173 4.78679043 Nephromyces sp. ex Molgula occidentalis 2544991 SAR_Eukaryotes SAR_Eukaryotes 60.2 9.82e-5   NTclustered gi|1735073273|gb|MK573204.1| 2544991 g18296 i0 91.111 0.235602094240838 45 3 23 1 85 128 26389 26345 Nephromyces sp. ex Molgula occidentalis isolate 638 apicoplast, partial genome blastn 45 60.2 1 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Nephromyces Nephromyces sp. ex Molgula occidentalis
24607045 24607045 PRJNA315314_S_NODE_30380_length_154_cov_2.184000_g30059_i0 PRJNA315314 30380 154 2.184 3.36336 Plasmodium vinckei 5860 SAR_Eukaryotes SAR_Eukaryotes 71.3 3.49e-8   NTclustered gi|1931714359|ref|XR_552297.2| 54757 g30059 i0 88.333 16.961038961039 60 6 38 1 91 149 4102 4043 Plasmodium vinckei vinckei ribosomal RNA (PVVCY_0502190), rRNA blastn 2612 71.3 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium vinckei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;