RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA315314" and tax_clade = "Candidatus Thermofonsia Clade 3"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Candidatus Thermofonsia Clade 3 · 8 ✖

bioproject 1

  • PRJNA315314 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6758459 6758459 PRJNA315314_S_NODE_19846_length_185_cov_7.980769_g19525_i0 PRJNA315314 19846 185 7.980769 14.76442265 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 196 6.9e-46   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g19525 i0 85.87 7.13513513513514 184 26 99 0 1 184 3495150 3495333 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 1320 196 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
6758772 6758772 PRJNA315314_S_NODE_9226_length_266_cov_84.050633_g8905_i0 PRJNA315314 9226 266 84.050633 223.57468378 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 209 1.36e-49   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g8905 i0 80.97 30.6052631578947 268 48 100 3 1 266 3494904 3494638 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 8141 209 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
10584483 10584483 PRJNA315314_S_NODE_10709_length_247_cov_49.009174_g10388_i0 PRJNA315314 10709 247 49.009174 121.05265978 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 195 3.51e-45   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g10388 i0 81.857 291.672064777328 237 37 95 6 1 234 3494667 3494434 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 72043 195 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
11859633 11859633 PRJNA315314_S_NODE_3250_length_442_cov_32.728814_g2930_i0 PRJNA315314 3250 442 32.728814 144.66135788 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 361 6.25e-95   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g2930 i0 84.35 156.721719457014 377 50 85 5 66 442 3495867 3495500 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 69271 361 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
14409772 14409772 PRJNA315314_S_NODE_2512_length_499_cov_33.212766_g2206_i0 PRJNA315314 2512 499 33.212766 165.73170234 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 416 1.4999999999999999e-111   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g2206 i0 82.107 227.845691382766 503 75 100 11 1 499 3495500 3495991 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 113695 416 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
14409931 14409931 PRJNA315314_S_NODE_5612_length_339_cov_28.432258_g5291_i0 PRJNA315314 5612 339 28.432258 96.38535462 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 424 5.89e-114   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g5291 i0 89.349 160.498525073746 338 35 99 1 1 338 3496990 3497326 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 54409 424 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
16958350 16958350 PRJNA315314_S_NODE_31214_length_152_cov_5.276423_g30893_i0 PRJNA315314 31214 152 5.276423 8.02016296 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 141 2.58e-29   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g30893 i0 83.66 56.1842105263158 153 22 99 3 2 152 3495045 3494894 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 8540 141 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.
24606739 24606739 PRJNA315314_S_NODE_13040_length_225_cov_7.841837_g12719_i0 PRJNA315314 13040 225 7.841837 17.64413325 Candidatus Roseilinea sp. 2838777 Bacteria Bacteria 154 5.33e-33   NTclustered gi|2314722916|dbj|AP024676.1| 2838777 g12719 i0 84.615 89.0666666666667 156 23 69 1 4 159 3497949 3497795 MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome blastn 20040 154 1 Bacteria Candidatus Thermofonsia Clade 3 Bacillati Chloroflexota Candidatus Thermofontia     Candidatus Roseilinea Candidatus Roseilinea sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;