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contig_metadata

9 rows where analysis = "blastn", bioproject = "PRJNA315314" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 9 ✖

bioproject 1

  • PRJNA315314 · 9 ✖

analysis 1

  • blastn · 9 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1655454 1655454 PRJNA315314_S_NODE_13322_length_223_cov_4.634021_g13001_i0 PRJNA315314 13322 223 4.634021 10.33386683 Podomonas capensis 2925399 Root_unresolved Root_unresolved 115 2.4900000000000004e-21   NTclustered gi|2206682168|gb|OM966641.1| 2925399 g13001 i0 83.594 28.8116591928251 128 15 57 6 97 223 4166 4288 Podomonas capensis strain SPRINTER small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 6425 115 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Podomonas Podomonas capensis
5484507 5484507 PRJNA315314_S_NODE_5245_length_350_cov_23.457944_g4924_i0 PRJNA315314 5245 350 23.457944 82.102804 Mylnikovia oxoniensis 1314681 Root_unresolved Root_unresolved 272 2.33e-68   NTclustered gi|2206682162|gb|OM966635.1| 1314681 g4924 i0 81.127 101.157142857143 355 53 100 11 1 350 3835 3490 Mylnikovia oxoniensis strain CCAP19012 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 35405 272 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Mylnikovia Mylnikovia oxoniensis
6168237 6168237 PRJNA315314_S_NODE_8005_length_285_cov_36.121094_g7684_i0 PRJNA315314 8005 285 36.121094 102.9451179 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 230 1.1299999999999995e-55   NTclustered gi|2206682169|gb|OM966642.1| 41120 g7684 i0 89.944 63.2105263157895 179 16 62 2 107 284 5246 5423 Apusomonas proboscidea strain MPSANABRIA15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 18015 231 0.995670995670996 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Apusomonas Apusomonas proboscidea
6758654 6758654 PRJNA315314_S_NODE_4206_length_390_cov_75.055402_g3885_i0 PRJNA315314 4206 390 75.055402 292.7160678 Catacumbia lutetiensis 2925415 Root_unresolved Root_unresolved 150 1.2799999999999999e-31   NTclustered gi|2206682166|gb|OM966639.1| 2925415 g3885 i0 89.744 33.4410256410256 117 12 30 0 1 117 5294 5178 Catacumbia lutetiensis strain ORSAYFEB19APU2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 13042 150 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Catacumbia Catacumbia lutetiensis
10584548 10584548 PRJNA315314_S_NODE_13829_length_219_cov_68.705263_g13508_i0 PRJNA315314 13829 219 68.705263 150.46452597 Catacumbia lutetiensis 2925415 Root_unresolved Root_unresolved 145 3.11e-30   NTclustered gi|2206682166|gb|OM966639.1| 2925415 g13508 i0 88.889 52.7168949771689 117 13 53 0 103 219 5178 5294 Catacumbia lutetiensis strain ORSAYFEB19APU2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11545 145 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Catacumbia Catacumbia lutetiensis
15683588 15683588 PRJNA315314_S_NODE_3093_length_451_cov_48.793839_g2775_i0 PRJNA315314 3093 451 48.793839 220.06021389 Catacumbia lutetiensis 2925415 Root_unresolved Root_unresolved 150 1.51e-31   NTclustered gi|2206682166|gb|OM966639.1| 2925415 g2775 i0 89.744 25.2971175166297 117 12 26 0 1 117 5294 5178 Catacumbia lutetiensis strain ORSAYFEB19APU2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11409 150 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Catacumbia Catacumbia lutetiensis
16958475 16958475 PRJNA315314_S_NODE_7874_length_287_cov_59.728682_g7553_i0 PRJNA315314 7874 287 59.728682 171.42131734 Catacumbia lutetiensis 2925415 Root_unresolved Root_unresolved 143 1.53e-29   NTclustered gi|2206682166|gb|OM966639.1| 2925415 g7553 i0 88.793 38.4529616724739 116 13 40 0 3 118 5187 5302 Catacumbia lutetiensis strain ORSAYFEB19APU2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11036 143 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Catacumbia Catacumbia lutetiensis
19507067 19507067 PRJNA315314_S_NODE_7876_length_287_cov_57.531008_g7555_i0 PRJNA315314 7876 287 57.531008 165.11399296 Catacumbia lutetiensis 2925415 Root_unresolved Root_unresolved 148 3.2899999999999996e-31   NTclustered gi|2206682166|gb|OM966639.1| 2925415 g7555 i0 89.655 39.1602787456446 116 12 40 0 3 118 5187 5302 Catacumbia lutetiensis strain ORSAYFEB19APU2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 11239 148 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Catacumbia Catacumbia lutetiensis
20782446 20782446 PRJNA315314_S_NODE_28777_length_157_cov_41.804688_g28456_i0 PRJNA315314 28777 157 41.804688 65.63336016 Thecamonas trahens 529818 Root_unresolved Root_unresolved 196 5.66e-46   NTclustered gi|761380055|ref|NC_026452.1| 529818 g28456 i0 89.241 101.273885350318 158 15 100 2 1 157 1805 1961 Thecamonas trahens strain ATCC 50062 mitochondrion, complete genome blastn 15900 196 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;