RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA314497" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 4 ✖

bioproject 1

  • PRJNA314497 · 4 ✖

analysis 1

  • blastn · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6168027 6168027 PRJNA314497_P_NODE_5065_length_152_cov_2.861789_g4913_i0 PRJNA314497 5065 152 2.861789 4.34991928 root 1 Root_unresolved Root_unresolved 281 1.46e-71   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g4913 i0 100 100 152 0 100 0 1 152 14445 14294 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 15200 281 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
7443107 7443107 PRJNA314497_P_NODE_4826_length_161_cov_10.500000_g4674_i0 PRJNA314497 4826 161 10.5 16.905 root 1 Root_unresolved Root_unresolved 298 1.56e-76   NTclustered gi|2079660852|emb|OU501478.1| 10515 g4674 i0 100 100 161 0 100 0 1 161 17839 17999 Human adenovirus 2 isolate ADVJA-00-BE genome assembly, chromosome: ADVJA-00-BE blastn 16100 298 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
24017053 24017053 PRJNA314497_P_NODE_4359_length_184_cov_2.974194_g4207_i0 PRJNA314497 4359 184 2.974194 5.47251696 root 1 Root_unresolved Root_unresolved 340 2.99e-89   NTclustered gi|2452970428|gb|OQ518271.1| 10515 g4207 i0 100 100 184 0 100 0 1 184 14457 14640 Human adenovirus 2 isolate HAdV-C2/USA/8A5/2011, complete genome blastn 18400 340 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
25291334 25291334 PRJNA314497_P_NODE_4520_length_175_cov_10.136986_g4368_i0 PRJNA314497 4520 175 10.136986 17.7397255 root 1 Root_unresolved Root_unresolved 324 2.83e-84   NTclustered gi|56160492|ref|AC_000007.1| 10515 g4368 i0 100 100 175 0 100 0 1 175 11989 11815 Human adenovirus 2, complete genome blastn 17500 324 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;