RNAquarium Metadata Server
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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA312899" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 10 ✖

tax_clade 1

bioproject 1

  • PRJNA312899 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
380517 380517 PRJNA312899_P_NODE_98341_length_162_cov_3.610619_g97899_i0 PRJNA312899 98341 162 3.610619 5.84920278 Entamoeba histolytica 5759 Evosea other_Eukaryota 110 7.89e-20   NTclustered gi|415339|emb|X65163.1| 5759 g97899 i0 88.043 0.567901234567901 92 11 57 0 71 162 5710 5619 E.histolytica rRNA blastn 92 110 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
8032596 8032596 PRJNA312899_P_NODE_32587_length_320_cov_19.789668_g32145_i0 PRJNA312899 32587 320 19.789668 63.3269376 Echinostelium minutum 300235 Evosea other_Eukaryota 571 1.86e-158   NTclustered gi|210062522|gb|AY842034.2| 300235 g32145 i0 99.057 20.015625 318 3 99 0 3 320 1866 2183 Echinostelium minutum strain ATCC 22345 18S ribosomal RNA gene, partial sequence blastn 6405 571 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Echinosteliales Echinosteliidae Echinostelium Echinostelium minutum
9307146 9307146 PRJNA312899_P_NODE_18948_length_433_cov_89.127604_g18507_i0 PRJNA312899 18948 433 89.127604 385.92252532 Didymium iridis 5793 Evosea other_Eukaryota 549 1.2199999999999996e-151   NTclustered gi|2687|emb|X60210.1| 5793 g18507 i0 89.498 9.18937644341801 438 40 100 6 1 433 5491 5055 D.iridis LSU rRNA gene blastn 3979 549 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium iridis
9307452 9307452 PRJNA312899_P_NODE_36428_length_299_cov_7.492000_g35986_i0 PRJNA312899 36428 299 7.492 22.40108 Coremiostelium polycephalum 142831 Evosea other_Eukaryota 93.5 1.64e-14   NTclustered gi|85062629|gb|DQ340387.1| 142831 g35986 i0 88.312 26.8494983277592 77 9 26 0 207 283 12448 12524 Dictyostelium polycephalum 17S ribosomal RNA, 5.8S ribosomal RNA, and 26S ribosomal RNA genes, complete sequence blastn 8028 93.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales   Coremiostelium Coremiostelium polycephalum
10584215 10584215 PRJNA312899_P_NODE_8869_length_634_cov_8.873504_g8479_i0 PRJNA312899 8869 634 8.873504 56.25801536 Acytostelium subglobosum 361139 Evosea other_Eukaryota 329 2.6e-85   NTclustered gi|831754130|ref|XM_012892568.1| 1410327 g8479 i0 82.415 63.2397476340694 381 64 60 3 204 582 441 62 Acytostelium subglobosum LB1 hypothetical protein partial mRNA blastn 40094 329 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
11267590 11267590 PRJNA312899_P_NODE_21589_length_404_cov_19.360563_g21148_i0 PRJNA312899 21589 404 19.360563 78.21667452 Didymium 5792 Evosea other_Eukaryota 649 0   NTclustered gi|117165666|dbj|AB259388.1| 289975 g21148 i0 96.447 99.6608910891089 394 12 98 2 1 394 31 422 Didymium bahiense gene for small subunit ribosomal RNA, partial sequence, specimen_voucher: TNS-M-Y-4948 (TNS) blastn 40263 651 0.996927803379416 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium bahiense
13134050 13134050 PRJNA312899_P_NODE_87171_length_167_cov_0.864407_g86729_i0 PRJNA312899 87171 167 0.864407 1.44355969 Acytostelium leptosomum 133408 Evosea other_Eukaryota 298 1.63e-76   NTclustered gi|1057487862|gb|KX539491.1| 133408 g86729 i0 98.802 102.790419161677 167 2 100 0 1 167 3118 3284 Acytostelium leptosomum strain FG12A dihydrolipoamide acetyltransferase (pdhC) gene, complete cds blastn 17166 298 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium leptosomum
14408260 14408260 PRJNA312899_P_NODE_29992_length_337_cov_4.347222_g29550_i0 PRJNA312899 29992 337 4.347222 14.65013814 Didymium iridis 5793 Evosea other_Eukaryota 529 1.2099999999999994e-145   NTclustered gi|116010570|emb|AM407415.1| 5793 g29550 i0 95.509 69.2611275964392 334 10 98 5 3 333 1008 1339 Didymium iridis partial 26S rRNA gene, isolate CR8-1 blastn 23341 529 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium iridis
18231227 18231227 PRJNA312899_P_NODE_41275_length_277_cov_3.442982_g40833_i0 PRJNA312899 41275 277 3.442982 9.53706014 Dictyostelium purpureum 5786 Evosea other_Eukaryota 60.2 1.52e-4   NTclustered gi|330802404|ref|XM_003289160.1| 5786 g40833 i0 100 0.115523465703971 32 0 12 0 216 247 3619 3588 Dictyostelium purpureum uncharacterized protein (DICPUDRAFT_153539), partial mRNA blastn 32 60.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
20780602 20780602 PRJNA312899_P_NODE_16797_length_460_cov_16.155718_g16358_i0 PRJNA312899 16797 460 16.155718 74.3163028 uncultured Soliformovum 2510342 Evosea other_Eukaryota 730 0   NTclustered gi|1564356923|gb|MK443523.1| 2510342 g16358 i0 97.647 40.9434782608696 425 10 92 0 32 456 425 1 Uncultured Soliformovum clone OTUA345 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 18834 730 1 Eukaryota Amoebozoa   Evosea Variosea Protosteliida Protosteliaceae   uncultured Soliformovum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;