RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA312899" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA312899 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4892631 4892631 PRJNA312899_P_NODE_61924_length_213_cov_2.487805_g61482_i0 PRJNA312899 61924 213 2.487805 5.29902465 Haliclystus 37533 Cnidaria other_Eukaryota 152 1.8e-32   NTclustered gi|66864841|gb|AY920782.1| 168739 g61482 i0 94.898 43.5727699530516 98 3 46 2 117 213 2125 2029 Haliclystus sanjuanensis large subunit 28S ribosomal RNA gene, partial sequence blastn 9281 152 1 Eukaryota Opisthokonta Metazoa Cnidaria Staurozoa Stauromedusae Haliclystidae Haliclystus Haliclystus sanjuanensis
11267936 11267936 PRJNA312899_P_NODE_53489_length_236_cov_1.090909_g53047_i0 PRJNA312899 53489 236 1.090909 2.57454524 Saccosporidae 519444 Cnidaria other_Eukaryota 54.7 0.006   NTclustered gi|237512529|gb|FJ981822.1| 271932 g53047 i0 96.97 0.542372881355932 33 0 14 1 78 109 2817 2785 Tetracapsuloides bryosalmonae clone 2 28S large subunit ribosomal RNA gene, partial sequence blastn 128 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Myxozoa Malacovalvulida Saccosporidae Tetracapsuloides Tetracapsuloides bryosalmonae
17641952 17641952 PRJNA312899_P_NODE_16354_length_466_cov_50.755396_g15916_i0 PRJNA312899 16354 466 50.755396 236.52014536 Metazoa 33208 Cnidaria other_Eukaryota 58.4 0.001   NTclustered gi|2917940687|emb|OZ237555.1| 6108 g15916 i0 100 6.07081545064378 31 0 7 0 165 195 31313625 31313595 Anemonia sulcata genome assembly, chromosome: 1 blastn 2829 58.4 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Actiniidae Anemonia Anemonia sulcata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;