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contig_metadata

30 rows where analysis = "blastn", bioproject = "PRJNA312899" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 30 ✖

tax_clade 1

bioproject 1

  • PRJNA312899 · 30 ✖

analysis 1

  • blastn · 30 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
380142 380142 PRJNA312899_P_NODE_76061_length_184_cov_3.488889_g75619_i0 PRJNA312899 76061 184 3.488889 6.41955576 Planilamina ovata 2684848 SAR_Eukaryotes SAR_Eukaryotes 182 1.92e-41   NTclustered gi|1784308423|gb|MN830171.1| 2684848 g75619 i0 85.549 73.8804347826087 173 25 94 0 12 184 146 318 Planilamina ovata isolate LJ-II-20170502 large subunit ribosomal RNA gene, partial sequence blastn 13594 182 1 Eukaryota Sar   Ciliophora Phyllopharyngea Dysteriida Kyaroikeidae Planilamina Planilamina ovata
1064851 1064851 PRJNA312899_P_NODE_61481_length_214_cov_2.806061_g61039_i0 PRJNA312899 61481 214 2.806061 6.00497054 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 316 6.05e-82   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g61039 i0 96.354 95.1588785046729 192 7 90 0 23 214 3082 2891 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 20364 316 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
1654246 1654246 PRJNA312899_P_NODE_38222_length_290_cov_9.535270_g37780_i0 PRJNA312899 38222 290 9.53527 27.652283 Tetrahymena rostrata 5909 SAR_Eukaryotes SAR_Eukaryotes 97.1 1.22e-15   NTclustered gi|1585114938|gb|MG744347.1| 5909 g37780 i0 84.314 2.15172413793103 102 13 35 3 123 223 43822 43921 Tetrahymena rostrata isolate TRO1 mitochondrion blastn 624 97.1 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena rostrata
1654665 1654665 PRJNA312899_P_NODE_61402_length_214_cov_4.933333_g60960_i0 PRJNA312899 61402 214 4.933333 10.55733262 Paramecium tetraurelia 5888 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.005   NTclustered gi|145478478|ref|XM_001425225.1| 5888 g60960 i0 100 0.135514018691589 29 0 14 0 135 163 2823 2795 Paramecium tetraurelia uncharacterized protein (GSPATT00028899001), partial mRNA blastn 29 54.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
2929984 2929984 PRJNA312899_P_NODE_30203_length_335_cov_65.667832_g29761_i0 PRJNA312899 30203 335 65.667832 219.9872372 Cyclidium glaucoma 35100 SAR_Eukaryotes SAR_Eukaryotes 584 2.52e-162   NTclustered gi|111035915|emb|AJ781092.1| 35100 g29761 i0 98.204 99.6417910447761 334 6 99 0 2 335 362 29 Cyclidium glaucoma partial 23S rRNA gene, strain ATCC 30701 blastn 33380 584 1 Eukaryota Sar   Ciliophora Oligohymenophorea Pleuronematida Cyclidiidae Cyclidium Cyclidium glaucoma
3615593 3615593 PRJNA312899_P_NODE_78543_length_181_cov_1.545455_g78101_i0 PRJNA312899 78543 181 1.545455 2.79727355 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 335 1.36e-87   NTclustered gi|1237411823|gb|KX832089.1| 5912 g78101 i0 100 100.049723756906 181 0 100 0 1 181 642 822 Tetrahymena tropicalis voucher 30277 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence; macronuclear blastn 18109 335 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena tropicalis
6756593 6756593 PRJNA312899_P_NODE_10326_length_588_cov_34.883117_g9915_i0 PRJNA312899 10326 588 34.883117 205.11272796 Paramecium tetraurelia 5888 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.016   NTclustered gi|145534274|ref|XM_001452845.1| 5888 g9915 i0 96.97 0.0561224489795918 33 0 5 1 461 492 1492 1460 Paramecium tetraurelia uncharacterized protein (GSPATT00002886001), partial mRNA blastn 33 54.7 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
6757930 6757930 PRJNA312899_P_NODE_82866_length_173_cov_2.072581_g82424_i0 PRJNA312899 82866 173 2.072581 3.58556513 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 230 6.2599999999999985e-56   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g82424 i0 90.857 47.2369942196532 175 10 100 5 1 173 2572 2402 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 8172 230 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
8032530 8032530 PRJNA312899_P_NODE_28127_length_350_cov_2.644518_g27685_i0 PRJNA312899 28127 350 2.644518 9.255813 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 558 1.5999999999999994e-154   NTclustered gi|1389430805|gb|MH341633.1| 1938391 g27685 i0 95.442 40.2914285714286 351 15 100 1 1 350 1832 2182 Chilodonella hexasticha strain C.hexasticha AS large subunit ribosomal RNA gene, partial sequence blastn 14102 558 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha
8033535 8033535 PRJNA312899_P_NODE_84407_length_170_cov_1.669421_g83965_i0 PRJNA312899 84407 170 1.669421 2.8380157 Uronema marinum 35107 SAR_Eukaryotes SAR_Eukaryotes 117 4.97e-22   NTclustered gi|1464314795|ref|NC_039174.1| 35107 g83965 i0 84.615 1.37647058823529 117 18 69 0 1 117 18862 18978 Uronema marinum mitochondrion, complete genome blastn 234 117 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Uronematidae Uronema Uronema marinum
9308168 9308168 PRJNA312899_P_NODE_76808_length_183_cov_3.805970_g76366_i0 PRJNA312899 76808 183 3.80597 6.9649251 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 230 6.71e-56   NTclustered gi|11466252|ref|NC_000862.1| 5908 g76366 i0 89.56 9.00546448087432 182 17 98 1 4 183 20622 20441 Tetrahymena pyriformis mitochondrion, complete genome blastn 1648 230 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis
10582966 10582966 PRJNA312899_P_NODE_15369_length_481_cov_126.710648_g14934_i0 PRJNA312899 15369 481 126.710648 609.47821688 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 599 1.3299999999999995e-166   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g14934 i0 96.175 31.0914760914761 366 14 76 0 1 366 366 1 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 14955 599 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
10583435 10583435 PRJNA312899_P_NODE_40969_length_278_cov_6.301310_g40527_i0 PRJNA312899 40969 278 6.30131 17.5176418 Coleps hirtus 60000 SAR_Eukaryotes SAR_Eukaryotes 499 7.6e-137   NTclustered gi|2026535536|gb|MW929305.1| 60000 g40527 i0 98.929 101.438848920863 280 1 100 2 1 278 2244 2523 Coleps hirtus strain AG Berninger/Pickham Uni Salzburg small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 28200 499 1 Eukaryota Sar   Ciliophora Prostomatea Prorodontida Colepidae Coleps Coleps hirtus
11267552 11267552 PRJNA312899_P_NODE_17169_length_455_cov_27.108374_g16730_i0 PRJNA312899 17169 455 27.108374 123.3431017 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 723 0   NTclustered gi|114329902|ref|NC_008339.1| 5907 g16730 i0 95.385 66.3516483516484 455 19 100 2 1 455 848 1300 Tetrahymena pigmentosa mitochondrion, complete genome blastn 30190 723 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pigmentosa
11267663 11267663 PRJNA312899_P_NODE_29189_length_342_cov_7.337884_g28747_i0 PRJNA312899 29189 342 7.337884 25.09556328 Paramecium 5884 SAR_Eukaryotes SAR_Eukaryotes 632 9.079999999999999e-177   NTclustered gi|325156266|gb|JF304163.1| 5886 g28747 i0 100 99.9269005847953 342 0 100 0 1 342 448 789 Paramecium primaurelia strain 90 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence; macronuclear blastn 34175 632 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium primaurelia
12542851 12542851 PRJNA312899_P_NODE_15390_length_481_cov_18.210648_g14955_i0 PRJNA312899 15390 481 18.210648 87.59321688 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 732 0   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g14955 i0 94.203 96.7380457380457 483 22 100 5 1 481 2842 2364 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 46531 732 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
13133935 13133935 PRJNA312899_P_NODE_79991_length_178_cov_7.558140_g79549_i0 PRJNA312899 79991 178 7.55814 13.4534892 Chilodonella piscicola 1654720 SAR_Eukaryotes SAR_Eukaryotes 324 2.89e-84   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g79549 i0 99.438 91.1516853932584 178 1 100 0 1 178 2165 2342 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 16225 324 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
14408562 14408562 PRJNA312899_P_NODE_4692_length_832_cov_58.024266_g4400_i0 PRJNA312899 4692 832 58.024266 482.76189312 Vorticellides astyliformis 1173325 SAR_Eukaryotes SAR_Eukaryotes 640 1.3999999999999998e-178   NTclustered gi|562815644|gb|KF639908.1| 1173325 g4400 i0 83.965 17.7079326923077 686 91 82 16 1 681 673 2 Vorticellides astyliformis small subunit ribosomal RNA gene, partial sequence blastn 14733 640 1 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Vorticellidae Vorticellides Vorticellides astyliformis
14408955 14408955 PRJNA312899_P_NODE_69312_length_195_cov_1.397260_g68870_i0 PRJNA312899 69312 195 1.39726 2.724657 Euplotes sp. BB-2004 291624 SAR_Eukaryotes SAR_Eukaryotes 65.8 2.16e-6   NTclustered gi|51947518|gb|AY608636.1| 291624 g68870 i0 100 8.07179487179487 35 0 18 0 1 35 24 58 Euplotes sp. BB-2004 hydrogenosomal NADH dehydrogenase 51 kDa subunit gene, complete cds; nuclear gene for hydrogenosomal product blastn 1574 65.8 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes sp. BB-2004
14409240 14409240 PRJNA312899_P_NODE_88412_length_166_cov_1.094017_g87970_i0 PRJNA312899 88412 166 1.094017 1.81606822 Oxytricha granulifera 5947 SAR_Eukaryotes SAR_Eukaryotes 281 1.63e-71   NTclustered gi|1576976031|gb|MG836534.1| 5947 g87970 i0 98.137 97.6204819277108 161 3 97 0 6 166 2440 2600 Oxytricha granulifera isolate 7PVC-2b 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 16205 281 1 Eukaryota Sar   Ciliophora Spirotrichea Sporadotrichida Oxytrichidae Oxytricha Oxytricha granulifera
16956537 16956537 PRJNA312899_P_NODE_19694_length_424_cov_545.405333_g19253_i0 PRJNA312899 19694 424 545.405333 2312.51861192 Tetrahymena chironomi 3034767 SAR_Eukaryotes SAR_Eukaryotes 739 0   NTclustered gi|2459327221|gb|OQ626840.1| 3034767 g19253 i0 98.118 88.6391509433962 425 6 99 2 2 424 826 402 Tetrahymena chironomi isolate LLH20220320 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 37583 739 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena chironomi
18231436 18231436 PRJNA312899_P_NODE_54055_length_234_cov_2.481081_g53613_i0 PRJNA312899 54055 234 2.481081 5.80572954 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.021   NTclustered gi|471223929|ref|XM_004030681.1| 5932 g53613 i0 100 0.11965811965812 28 0 12 0 187 214 537 510 Ichthyophthirius multifiliis hypothetical protein (IMG5_154760) mRNA, complete cds blastn 28 52.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
18915739 18915739 PRJNA312899_P_NODE_14495_length_495_cov_49.452915_g14063_i0 PRJNA312899 14495 495 49.452915 244.79192925 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 909 0   NTclustered gi|10662|emb|X56170.1| 5894 g14063 i0 99.798 98.8464646464647 495 1 100 0 1 495 506 12 T.canadensis gene for small subunit ribosomal RNA (16S like rRNA) blastn 48929 915 0.99344262295082 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena canadensis
20190374 20190374 PRJNA312899_P_NODE_10536_length_582_cov_97.823640_g10125_i0 PRJNA312899 10536 582 97.82364 569.3335848 Sessilida 1974272 SAR_Eukaryotes SAR_Eukaryotes 684 0   NTclustered gi|759083557|gb|KM222174.1| 1607876 g10125 i0 98.454 65.5395189003436 388 6 67 0 171 558 388 1 Epistylis sp. FG-2015 voucher SZ2011052302 large subunit ribosomal RNA gene, partial sequence blastn 38144 689 0.992743105950653 Eukaryota Sar   Ciliophora Oligohymenophorea Sessilida Epistylidae Epistylis Epistylis sp. FG-2015
20780447 20780447 PRJNA312899_P_NODE_103417_length_160_cov_2.756757_g102975_i0 PRJNA312899 103417 160 2.756757 4.4108112 Ichthyophthirius multifiliis 5932 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.013   NTclustered gi|471223161|ref|XM_004030318.1| 5932 g102975 i0 100 0.175 28 0 18 0 48 75 690 717 Ichthyophthirius multifiliis hypothetical protein (IMG5_162330) mRNA, complete cds blastn 28 52.8 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
20780858 20780858 PRJNA312899_P_NODE_30897_length_331_cov_5.315603_g30455_i0 PRJNA312899 30897 331 5.315603 17.59464593 Leptopharynx costatus 502090 SAR_Eukaryotes SAR_Eukaryotes 593 4.129999999999999e-165   NTclustered gi|558697263|gb|KC832958.1| 502090 g30455 i0 99.691 100.746223564955 324 1 98 0 1 324 324 1 Leptopharynx costatus 28S ribosomal RNA gene, partial sequence blastn 33347 593 1 Eukaryota Sar   Ciliophora Nassophorea Microthoracida Microthoracidae Leptopharynx Leptopharynx costatus
20781841 20781841 PRJNA312899_P_NODE_88217_length_166_cov_1.743590_g87775_i0 PRJNA312899 88217 166 1.74359 2.8943594 Bakuella subtropica 1295181 SAR_Eukaryotes SAR_Eukaryotes 135 1.34e-27   NTclustered gi|2468680567|ref|NC_072596.1| 1295181 g87775 i0 82.803 13.1385542168675 157 21 92 6 9 161 45124 44970 Bakuella subtropica mitochondrion, complete genome blastn 2181 135 1 Eukaryota Sar   Ciliophora Spirotrichea Urostylida Bakuellidae Bakuella Bakuella subtropica
21466596 21466596 PRJNA312899_P_NODE_61817_length_213_cov_6.262195_g61375_i0 PRJNA312899 61817 213 6.262195 13.33847535 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 372 1.27e-98   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g61375 i0 98.122 79.8826291079812 213 4 100 0 1 213 2578 2366 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 17015 372 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
22055779 22055779 PRJNA312899_P_NODE_26778_length_360_cov_5.926045_g26336_i0 PRJNA312899 26778 360 5.926045 21.333762 Euplotes woodruffi 5942 SAR_Eukaryotes SAR_Eukaryotes 551 2.7599999999999992e-152   NTclustered gi|1233819913|gb|KX516605.1| 5942 g26336 i0 95.129 96.3111111111111 349 17 97 0 12 360 351 3 Euplotes woodruffi isolate Z1 large subunit ribosomal RNA gene, partial sequence blastn 34672 551 1 Eukaryota Sar   Ciliophora Spirotrichea Euplotida Euplotidae Euplotes Euplotes woodruffi
23331243 23331243 PRJNA312899_P_NODE_22099_length_399_cov_27.985714_g21657_i0 PRJNA312899 22099 399 27.985714 111.66299886 Tetrahymena pyriformis 5908 SAR_Eukaryotes SAR_Eukaryotes 318 3.409999999999999e-82   NTclustered gi|2459327249|gb|OQ626843.1| 5908 g21657 i0 81.401 92.7368421052632 414 55 100 16 1 399 800 394 Tetrahymena pyriformis isolate LLH20220320 pop variant pop1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 37002 318 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena pyriformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;