contig_metadata
7 rows where analysis = "blastn", bioproject = "PRJNA312899" and tax_phylum = "Chloroflexota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4206113 | 4206113 | PRJNA312899_P_NODE_102664_length_161_cov_0.910714_g102222_i0 | PRJNA312899 | 102664 | 161 | 0.910714 | 1.46624954 | Dehalococcoidia bacterium | 2026734 | Bacteria | Bacteria | 139 | 9.98e-29 | NTclustered | gi|2621704004|emb|OY762959.1| | 2026734 | g102222 | i0 | 82.609 | 73.8509316770186 | 161 | 24 | 99 | 4 | 3 | 161 | 838883 | 838725 | MAG: Dehalococcoidia bacterium isolate a8fc5444-7059-4be1-bdcb-92646be6befe genome assembly, chromosome: 1 | blastn | 11890 | 139 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium | |||||
| 7442518 | 7442518 | PRJNA312899_P_NODE_42906_length_270_cov_15.027149_g42464_i0 | PRJNA312899 | 42906 | 270 | 15.027149 | 40.5733023 | Bacillati | 1783272 | Bacteria | Bacteria | 115 | 3.11e-21 | NTclustered | gi|2513924934|gb|CP126532.1| | 2306968 | g42464 | i0 | 93.506 | 31.7111111111111 | 77 | 5 | 29 | 0 | 61 | 137 | 3899518 | 3899442 | MAG: Ktedonobacterales bacterium isolate bin_006 chromosome, complete genome | blastn | 8562 | 115 | 1 | Bacteria | Bacillati | Chloroflexota | Ktedonobacteria | Ktedonobacterales | Ktedonobacterales bacterium | ||||
| 10584265 | 10584265 | PRJNA312899_P_NODE_91689_length_165_cov_0.879310_g91247_i0 | PRJNA312899 | 91689 | 165 | 0.87931 | 1.4508615 | Dehalococcoidia bacterium | 2026734 | Bacteria | Bacteria | 156 | 1.02e-33 | NTclustered | gi|2626282194|emb|OY839116.1| | 2026734 | g91247 | i0 | 83.636 | 5.33333333333333 | 165 | 27 | 100 | 0 | 1 | 165 | 425621 | 425457 | MAG: Dehalococcoidia bacterium isolate 44b3abb6-b6b9-4f11-be96-93ee54cc77f6 genome assembly, chromosome: 1 | blastn | 880 | 156 | 1 | Bacteria | Bacillati | Chloroflexota | Dehalococcoidia | Dehalococcoidia bacterium | |||||
| 13132880 | 13132880 | PRJNA312899_P_NODE_20091_length_420_cov_12.760108_g19650_i0 | PRJNA312899 | 20091 | 420 | 12.760108 | 53.5924536 | Candidatus Roseilinea sp. | 2838777 | Bacteria | Bacteria | 370 | 9.83e-98 | NTclustered | gi|2314722916|dbj|AP024676.1| | 2838777 | g19650 | i0 | 84.197 | 11.8880952380952 | 386 | 55 | 91 | 6 | 37 | 418 | 3495623 | 3496006 | MAG: Candidatus Roseilinea sp. KatS3mg053 DNA, complete genome | blastn | 4993 | 370 | 1 | Bacteria | Candidatus Thermofonsia Clade 3 | Bacillati | Chloroflexota | Candidatus Thermofontia | Candidatus Roseilinea | Candidatus Roseilinea sp. | |||
| 16956834 | 16956834 | PRJNA312899_P_NODE_3554_length_924_cov_56.042286_g3296_i0 | PRJNA312899 | 3554 | 924 | 56.042286 | 517.83072264 | uncultured Chloroflexia bacterium | 1672391 | Bacteria | Bacteria | 948 | 0 | NTclustered | gi|2874253860|emb|OY969916.1| | 1672391 | g3296 | i0 | 85.335 | 157.174242424242 | 941 | 111 | 100 | 18 | 1 | 924 | 273281 | 274211 | MAG: uncultured Chloroflexia bacterium isolate MFD01916.bin.3.39 genome assembly, chromosome: 1 | blastn | 145229 | 948 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | uncultured Chloroflexia bacterium | |||||
| 16957282 | 16957282 | PRJNA312899_P_NODE_60694_length_216_cov_2.443114_g60252_i0 | PRJNA312899 | 60694 | 216 | 2.443114 | 5.27712624 | Roseiflexus sp. RS-1 | 357808 | Bacteria | Bacteria | 207 | 3.84e-49 | NTclustered | gi|470481958|ref|NR_076505.1| | 357808 | g60252 | i0 | 86.294 | 11.4722222222222 | 197 | 20 | 90 | 6 | 1 | 194 | 1420 | 1228 | Roseiflexus sp. RS-1 strain RS-1 23S ribosomal RNA, complete sequence | blastn | 2478 | 207 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Chloroflexales | Roseiflexaceae | Roseiflexus | Roseiflexus sp. RS-1 | ||
| 18230576 | 18230576 | PRJNA312899_P_NODE_100515_length_162_cov_0.902655_g100073_i0 | PRJNA312899 | 100515 | 162 | 0.902655 | 1.4623011 | Candidatus Promineifilum breve | 1806508 | Bacteria | Bacteria | 169 | 1.28e-37 | NTclustered | gi|1041165931|emb|LN890655.2| | 1806508 | g100073 | i0 | 85.625 | 0.987654320987654 | 160 | 23 | 99 | 0 | 3 | 162 | 19450 | 19291 | Ardenticatena sp. Cfx-K strain Cfx-K genome assembly, chromosome: I | blastn | 160 | 169 | 1 | Bacteria | Bacillati | Chloroflexota | Ardenticatenia | Candidatus Promineifilales | Candidatus Promineifilaceae | Candidatus Promineifilum | Candidatus Promineifilum breve |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;