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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA312899" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 7 ✖

tax_clade 1

bioproject 1

  • PRJNA312899 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1653958 1653958 PRJNA312899_P_NODE_2282_length_1081_cov_32.059109_g2080_i0 PRJNA312899 2282 1081 32.059109 346.55896829 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 1619070 Bacteria Bacteria 1991 0   NTclustered gi|837350690|gb|CP011211.1| 1619070 g2080 i0 99.907 246.63644773358 1081 1 100 0 1 1081 851529 850449 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome blastn 266614 1991 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
1654685 1654685 PRJNA312899_P_NODE_62082_length_213_cov_1.243902_g61640_i0 PRJNA312899 62082 213 1.243902 2.64951126 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 350 5.94e-92   NTclustered gi|2306607015|emb|OX335598.1| 2026720 g61640 i0 96.244 6.97652582159624 213 8 100 0 1 213 62076 62288 Candidatus Saccharibacteria bacterium isolate PRJEB56001 genome assembly, chromosome: contig00001 blastn 1486 350 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
2930736 2930736 PRJNA312899_P_NODE_73283_length_188_cov_1.467626_g72841_i0 PRJNA312899 73283 188 1.467626 2.75913688 Candidatus Saccharibacteria genomosp. TM7-H1 2080739 Bacteria Bacteria 145 2.58e-30   NTclustered gi|1566427536|gb|CP026537.1| 2080739 g72841 i0 93.75 1.1063829787234 96 6 51 0 1 96 435573 435668 Candidatus Saccharibacteria genomosp. TM7-H1 isolate E1 chromosome blastn 208 145 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria genomosp. TM7-H1
9308370 9308370 PRJNA312899_P_NODE_89508_length_166_cov_0.871795_g89066_i0 PRJNA312899 89508 166 0.871795 1.4471797 Candidatus Nanosynbacter sp. HMT-352 2899133 Bacteria Bacteria 302 1.2500000000000001e-77   NTclustered gi|2218410560|gb|CP089288.1| 2899133 g89066 i0 99.398 11.9879518072289 166 1 100 0 1 166 135775 135610 Candidatus Nanosynbacter sp. HMT-352 strain TM7-037 chromosome blastn 1990 302 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Nanosynbacterales Candidatus Nanosynbacteraceae Candidatus Nanosynbacter Candidatus Nanosynbacter sp. HMT-352
10584115 10584115 PRJNA312899_P_NODE_82449_length_174_cov_1.632000_g82007_i0 PRJNA312899 82449 174 1.632 2.83968 Candidatus Saccharibacteria genomosp. TM7-H1 2080739 Bacteria Bacteria 311 2.19e-80   NTclustered gi|1566427536|gb|CP026537.1| 2080739 g82007 i0 98.857 1.00574712643678 175 1 100 1 1 174 491671 491497 Candidatus Saccharibacteria genomosp. TM7-H1 isolate E1 chromosome blastn 175 311 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria genomosp. TM7-H1
24605643 24605643 PRJNA312899_P_NODE_45400_length_261_cov_10.400943_g44958_i0 PRJNA312899 45400 261 10.400943 27.14646123 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 1619070 Bacteria Bacteria 481 2.56e-131   NTclustered gi|837350690|gb|CP011211.1| 1619070 g44958 i0 100 419.325670498084 260 0 99 0 2 261 850115 849856 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome blastn 109444 481 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
24606207 24606207 PRJNA312899_P_NODE_76300_length_184_cov_1.511111_g75858_i0 PRJNA312899 76300 184 1.511111 2.78044424 Candidatus Saccharibacteria bacterium oral taxon 488 713059 Bacteria Bacteria 268 1.43e-67   NTclustered gi|1842065531|gb|CP040002.1| 713059 g75858 i0 92.935 6.93478260869565 184 13 100 0 1 184 183610 183427 Candidatus Saccharibacteria bacterium oral taxon 488 strain AC002 chromosome, complete genome blastn 1276 268 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 488

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;