RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA312899" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 6 ✖

bioproject 1

  • PRJNA312899 · 6 ✖

analysis 1

  • blastn · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7442740 7442740 PRJNA312899_P_NODE_61826_length_213_cov_5.597561_g61384_i0 PRJNA312899 61826 213 5.597561 11.92280493 Orthornavirae 2732396 Viruses Viruses 329 7.73e-86   NTclustered gi|2209094953|gb|OL472548.1| 2900448 g61384 i0 100 8.30985915492958 178 0 99 0 36 213 415 238 MAG: Brine shrimp qin-like virus 1 isolate SH/16 RNA-dependent RNA polymerase gene, complete cds blastn 1770 329 1 Viruses   Orthornavirae Negarnaviricota Chunqiuviricetes Muvirales Qinviridae   brine shrimp qin-like virus 1
9307767 9307767 PRJNA312899_P_NODE_53328_length_236_cov_2.181818_g52886_i0 PRJNA312899 53328 236 2.181818 5.14909048 brine shrimp yue-like virus 9 2900461 Viruses Viruses 429 8.369999999999998e-116   NTclustered gi|2209095310|gb|OL472861.1| 2900461 g52886 i0 99.574 2.98728813559322 235 1 99 0 1 235 114 348 MAG: Brine shrimp yue-like virus 9 isolate SH/98 segment 2 hypothetical protein gene, complete cds blastn 705 429 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 9
9308257 9308257 PRJNA312899_P_NODE_82768_length_173_cov_4.508065_g82326_i0 PRJNA312899 82768 173 4.508065 7.79895245 Sclerotinia sclerotiorum virga-like virus 1 2822935 Viruses Viruses 294 2.19e-75   NTclustered gi|2029278226|gb|MT646383.1| 2822935 g82326 i0 98.788 20.2890173410405 165 2 95 0 1 165 1635 1799 MAG: Sclerotinia sclerotiorum virga-like virus 1, partial genome blastn 3510 294 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Virgaviridae   Sclerotinia sclerotiorum virga-like virus 1
14407810 14407810 PRJNA312899_P_NODE_103532_length_158_cov_2.807339_g103090_i0 PRJNA312899 103532 158 2.807339 4.43559562 Varroa picorna-like virus 2873563 Viruses Viruses 171 3.46e-38   NTclustered gi|2111829811|gb|MZ822077.1| 2873563 g103090 i0 93.22 0.746835443037975 118 5 73 3 1 115 7807 7924 MAG: Varroa picorna-like virus isolate No11-Mi016-HLJ2018, complete genome blastn 118 171 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Varroa picorna-like virus
17642439 17642439 PRJNA312899_P_NODE_59854_length_218_cov_3.621302_g59412_i0 PRJNA312899 59854 218 3.621302 7.89443836 Orthornavirae 2732396 Viruses Viruses 383 6.02e-102   NTclustered gi|2209094955|gb|OL472549.1| 2900448 g59412 i0 98.19 7.02293577981651 221 1 100 1 1 218 6072 6292 MAG: Brine shrimp qin-like virus 1 isolate XZ/98-19 RNA-dependent RNA polymerase gene, complete cds blastn 1531 383 1 Viruses   Orthornavirae Negarnaviricota Chunqiuviricetes Muvirales Qinviridae   brine shrimp qin-like virus 1
19505374 19505374 PRJNA312899_P_NODE_32756_length_319_cov_21.303704_g32314_i0 PRJNA312899 32756 319 21.303704 67.95881576 brine shrimp yue-like virus 3 2900455 Viruses Viruses 523 5.269999999999999e-144   NTclustered gi|2209095234|gb|OL472819.1| 2900455 g32314 i0 99.65 8.96551724137931 286 1 90 0 15 300 47 332 MAG: Brine shrimp yue-like virus 3 isolate SH/98 segment 2 hypothetical protein gene, complete cds blastn 2860 523 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;