contig_metadata
25 rows where analysis = "blastn", bioproject = "PRJNA312899" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 380304 | 380304 | PRJNA312899_P_NODE_85281_length_168_cov_1.663866_g84839_i0 | PRJNA312899 | 85281 | 168 | 1.663866 | 2.79529488 | Leptotrichia sp. oral taxon 221 | 712362 | Bacteria | Bacteria | 270 | 3.5799999999999998e-68 | NTclustered | gi|2028889048|gb|CP072378.1| | 712362 | g84839 | i0 | 95.808 | 0.994047619047619 | 167 | 7 | 99 | 0 | 1 | 167 | 530805 | 530639 | Leptotrichia sp. oral taxon 221 strain F0705 chromosome, complete genome | blastn | 167 | 270 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 221 | ||
| 2340393 | 2340393 | PRJNA312899_P_NODE_92322_length_165_cov_0.879310_g91880_i0 | PRJNA312899 | 92322 | 165 | 0.87931 | 1.4508615 | Fusobacterium | 848 | Bacteria | Bacteria | 305 | 9.59e-79 | NTclustered | gi|2704983719|gb|CP077132.1| | 851 | g91880 | i0 | 100 | 99.9757575757576 | 165 | 0 | 100 | 0 | 1 | 165 | 82206 | 82042 | Fusobacterium nucleatum strain KCOM3208 chromosome, complete genome | blastn | 16496 | 305 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 2930404 | 2930404 | PRJNA312899_P_NODE_53783_length_235_cov_1.629032_g53341_i0 | PRJNA312899 | 53783 | 235 | 1.629032 | 3.8282252 | Leptotrichia hofstadii | 157688 | Bacteria | Bacteria | 407 | 3.9e-109 | NTclustered | gi|1708566027|dbj|AP019823.1| | 157688 | g53341 | i0 | 97.881 | 2.00851063829787 | 236 | 4 | 100 | 1 | 1 | 235 | 2296214 | 2296449 | Leptotrichia hofstadii JCM16775 DNA, complete genome | blastn | 472 | 407 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hofstadii | ||
| 2930807 | 2930807 | PRJNA312899_P_NODE_77123_length_183_cov_1.522388_g76681_i0 | PRJNA312899 | 77123 | 183 | 1.522388 | 2.78597004 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 305 | 1.08e-78 | NTclustered | gi|1708575239|dbj|AP019834.1| | 157687 | g76681 | i0 | 96.721 | 11.9016393442623 | 183 | 6 | 100 | 0 | 1 | 183 | 1010591 | 1010409 | Leptotrichia wadei JMUB3933 DNA, complete genome | blastn | 2178 | 305 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 4892653 | 4892653 | PRJNA312899_P_NODE_63504_length_209_cov_2.550000_g63062_i0 | PRJNA312899 | 63504 | 209 | 2.55 | 5.3295 | Fusobacterium | 848 | Bacteria | Bacteria | 375 | 9.57e-100 | NTclustered | gi|958162200|gb|CP013331.1| | 1307442 | g63062 | i0 | 99.048 | 13.8755980861244 | 210 | 0 | 99 | 1 | 2 | 209 | 666133 | 665924 | Fusobacterium hwasookii ChDC F174, complete genome | blastn | 2900 | 375 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium hwasookii | ||
| 6167807 | 6167807 | PRJNA312899_P_NODE_78465_length_181_cov_1.545455_g78023_i0 | PRJNA312899 | 78465 | 181 | 1.545455 | 2.79727355 | Fusobacterium | 848 | Bacteria | Bacteria | 291 | 2.9899999999999993e-74 | NTclustered | gi|1370537877|gb|CP028108.1| | 860 | g78023 | i0 | 95.58 | 47.4972375690608 | 181 | 8 | 100 | 0 | 1 | 181 | 2192869 | 2193049 | Fusobacterium periodonticum strain 2_1_31 chromosome, complete genome | blastn | 8597 | 291 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium periodonticum | ||
| 6757571 | 6757571 | PRJNA312899_P_NODE_61546_length_214_cov_1.854545_g61104_i0 | PRJNA312899 | 61546 | 214 | 1.854545 | 3.9687263 | Fusobacterium pseudoperiodonticum | 2663009 | Bacteria | Bacteria | 370 | 4.58e-98 | NTclustered | gi|1276714546|gb|CP024702.1| | 2663009 | g61104 | i0 | 98.113 | 79.8504672897196 | 212 | 4 | 99 | 0 | 3 | 214 | 1435563 | 1435774 | Fusobacterium pseudoperiodonticum strain KCOM 1282 chromosome, complete genome | blastn | 17088 | 370 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium pseudoperiodonticum | ||
| 6758164 | 6758164 | PRJNA312899_P_NODE_96926_length_163_cov_0.894737_g96484_i0 | PRJNA312899 | 96926 | 163 | 0.894737 | 1.45842131 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 291 | 2.64e-74 | NTclustered | gi|1708575239|dbj|AP019834.1| | 157687 | g96484 | i0 | 98.773 | 15.2883435582822 | 163 | 2 | 100 | 0 | 1 | 163 | 289890 | 289728 | Leptotrichia wadei JMUB3933 DNA, complete genome | blastn | 2492 | 291 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 8032119 | 8032119 | PRJNA312899_P_NODE_101347_length_161_cov_0.910714_g100905_i0 | PRJNA312899 | 101347 | 161 | 0.910714 | 1.46624954 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 298 | 1.56e-76 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g100905 | i0 | 100 | 1 | 161 | 0 | 100 | 0 | 1 | 161 | 2898 | 2738 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 161 | 298 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 9306933 | 9306933 | PRJNA312899_P_NODE_103388_length_160_cov_4.396396_g102946_i0 | PRJNA312899 | 103388 | 160 | 4.396396 | 7.0342336 | Cetobacterium somerae | 188913 | Bacteria | Bacteria | 267 | 4.35e-67 | NTclustered | gi|2865366169|gb|CP122292.1| | 188913 | g102946 | i0 | 96.875 | 57.00625 | 160 | 4 | 100 | 1 | 1 | 160 | 420161 | 420319 | Cetobacterium somerae strain MSU41 chromosome, complete genome | blastn | 9121 | 267 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 9308205 | 9308205 | PRJNA312899_P_NODE_78908_length_180_cov_2.335878_g78466_i0 | PRJNA312899 | 78908 | 180 | 2.335878 | 4.2045804 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 333 | 4.87e-87 | NTclustered | gi|2706407748|gb|CP077116.1| | 76857 | g78466 | i0 | 100 | 98.5611111111111 | 180 | 0 | 100 | 0 | 1 | 180 | 879572 | 879751 | Fusobacterium polymorphum strain KCOM1257 chromosome, complete genome | blastn | 17741 | 333 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 9308277 | 9308277 | PRJNA312899_P_NODE_83888_length_171_cov_1.672131_g83446_i0 | PRJNA312899 | 83888 | 171 | 1.672131 | 2.85934401 | Fusobacterium pseudoperiodonticum | 2663009 | Bacteria | Bacteria | 311 | 2.14e-80 | NTclustered | gi|2704959642|gb|CP077196.1| | 2663009 | g83446 | i0 | 99.415 | 65.1695906432749 | 171 | 1 | 100 | 0 | 1 | 171 | 272796 | 272966 | Fusobacterium pseudoperiodonticum strain SB039 chromosome, complete genome | blastn | 11144 | 311 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium pseudoperiodonticum | ||
| 9993114 | 9993114 | PRJNA312899_P_NODE_74628_length_186_cov_2.087591_g74186_i0 | PRJNA312899 | 74628 | 186 | 2.087591 | 3.88291926 | Fusobacterium | 848 | Bacteria | Bacteria | 344 | 2.34e-90 | NTclustered | gi|2705020071|gb|CP084132.1| | 851 | g74186 | i0 | 100 | 245.860215053763 | 186 | 0 | 100 | 0 | 1 | 186 | 1867899 | 1867714 | Fusobacterium nucleatum strain KCOM3713 chromosome, complete genome | blastn | 45730 | 344 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 10583042 | 10583042 | PRJNA312899_P_NODE_19229_length_430_cov_31.732283_g18788_i0 | PRJNA312899 | 19229 | 430 | 31.732283 | 136.4488169 | Fusobacterium pseudoperiodonticum | 2663009 | Bacteria | Bacteria | 778 | 0 | NTclustered | gi|1276720946|gb|CP024705.1| | 2663009 | g18788 | i0 | 99.532 | 15.9279069767442 | 427 | 2 | 99 | 0 | 1 | 427 | 1014385 | 1014811 | Fusobacterium pseudoperiodonticum strain KCOM 2653 chromosome, complete genome | blastn | 6849 | 778 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium pseudoperiodonticum | ||
| 11267507 | 11267507 | PRJNA312899_P_NODE_12129_length_543_cov_16.052632_g11702_i0 | PRJNA312899 | 12129 | 543 | 16.052632 | 87.16579176 | Bacteria | 2 | Bacteria | Bacteria | 610 | 7.02e-170 | NTclustered | gi|2769795739|gb|CP160094.1| | 187101 | g11702 | i0 | 90.021 | 51.0349907918969 | 471 | 47 | 87 | 0 | 1 | 471 | 708314 | 707844 | Sneathia vaginalis strain CCUG_64370 chromosome, complete genome | blastn | 27712 | 610 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Sneathia | Sneathia vaginalis | ||
| 11267567 | 11267567 | PRJNA312899_P_NODE_19689_length_425_cov_2.029255_g19248_i0 | PRJNA312899 | 19689 | 425 | 2.029255 | 8.62433375 | Fusobacterium | 848 | Bacteria | Bacteria | 747 | 0 | NTclustered | gi|515473282|gb|KF149938.1| | 1307442 | g19248 | i0 | 98.353 | 100.428235294118 | 425 | 7 | 100 | 0 | 1 | 425 | 619 | 1043 | Fusobacterium hwasookii ChDC F174 DNA helicase (dnaB) gene, partial cds | blastn | 42682 | 747 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium hwasookii | ||
| 11857807 | 11857807 | PRJNA312899_P_NODE_22130_length_399_cov_9.817143_g21688_i0 | PRJNA312899 | 22130 | 399 | 9.817143 | 39.17040057 | Leptotrichia sp. HMT-225 | 3058373 | Bacteria | Bacteria | 736 | 0 | NTclustered | gi|2557559843|gb|CP130323.1| | 3058373 | g21688 | i0 | 100 | 167.739348370927 | 398 | 0 | 99 | 0 | 1 | 398 | 197177 | 196780 | Leptotrichia sp. HMT-225 chromosome, complete genome | blastn | 66928 | 736 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. HMT-225 | ||
| 14407876 | 14407876 | PRJNA312899_P_NODE_12372_length_537_cov_58.809426_g11943_i0 | PRJNA312899 | 12372 | 537 | 58.809426 | 315.80661762 | Fusobacterium pseudoperiodonticum | 2663009 | Bacteria | Bacteria | 931 | 0 | NTclustered | gi|1276705688|gb|CP024698.1| | 2663009 | g11943 | i0 | 99.608 | 95.9106145251397 | 510 | 2 | 100 | 0 | 1 | 510 | 416023 | 415514 | Fusobacterium pseudoperiodonticum strain KCOM 1283 chromosome, complete genome | blastn | 51504 | 931 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium pseudoperiodonticum | ||
| 15092376 | 15092376 | PRJNA312899_P_NODE_47912_length_253_cov_2.289216_g47470_i0 | PRJNA312899 | 47912 | 253 | 2.289216 | 5.79171648 | Leptotrichia | 32067 | Bacteria | Bacteria | 436 | 5.419999999999999e-118 | NTclustered | gi|1708566027|dbj|AP019823.1| | 157688 | g47470 | i0 | 98.008 | 345.486166007905 | 251 | 5 | 99 | 0 | 1 | 251 | 2373514 | 2373764 | Leptotrichia hofstadii JCM16775 DNA, complete genome | blastn | 87408 | 440 | 0.990909090909091 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hofstadii | ||
| 15683161 | 15683161 | PRJNA312899_P_NODE_98213_length_163_cov_0.877193_g97771_i0 | PRJNA312899 | 98213 | 163 | 0.877193 | 1.42982459 | Fusobacterium nucleatum | 851 | Bacteria | Bacteria | 302 | 1.22e-77 | NTclustered | gi|2704981563|gb|CP077131.1| | 851 | g97771 | i0 | 100 | 99.0061349693252 | 163 | 0 | 100 | 0 | 1 | 163 | 2309062 | 2309224 | Fusobacterium nucleatum strain KCOM3321 chromosome, complete genome | blastn | 16138 | 302 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 18916577 | 18916577 | PRJNA312899_P_NODE_93155_length_164_cov_4.513043_g92713_i0 | PRJNA312899 | 93155 | 164 | 4.513043 | 7.40139052 | Streptobacillus | 34104 | Bacteria | Bacteria | 243 | 7.57e-60 | NTclustered | gi|1356701568|gb|CP027400.1| | 34105 | g92713 | i0 | 93.333 | 496.689024390244 | 165 | 9 | 100 | 2 | 1 | 164 | 409199 | 409362 | Streptobacillus moniliformis strain FDAARGOS_310 chromosome, complete genome | blastn | 81457 | 243 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Streptobacillus | Streptobacillus moniliformis | ||
| 19506320 | 19506320 | PRJNA312899_P_NODE_87776_length_167_cov_0.864407_g87334_i0 | PRJNA312899 | 87776 | 167 | 0.864407 | 1.44355969 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 303 | 3.5e-78 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g87334 | i0 | 99.401 | 2 | 167 | 1 | 100 | 0 | 1 | 167 | 2329362 | 2329528 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 334 | 303 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 23332209 | 23332209 | PRJNA312899_P_NODE_77059_length_183_cov_1.522388_g76617_i0 | PRJNA312899 | 77059 | 183 | 1.522388 | 2.78597004 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 316 | 5.009999999999999e-82 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g76617 | i0 | 97.814 | 6.79234972677596 | 183 | 4 | 100 | 0 | 1 | 183 | 754695 | 754513 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 1243 | 316 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 23332546 | 23332546 | PRJNA312899_P_NODE_99639_length_162_cov_0.902655_g99197_i0 | PRJNA312899 | 99639 | 162 | 0.902655 | 1.4623011 | Fusobacterium polymorphum | 76857 | Bacteria | Bacteria | 272 | 9.51e-69 | NTclustered | gi|2645888909|gb|CP141281.1| | 76857 | g99197 | i0 | 98.693 | 94.4444444444444 | 153 | 2 | 94 | 0 | 1 | 153 | 590398 | 590550 | Fusobacterium polymorphum strain 40A2 chromosome, complete genome | blastn | 15300 | 272 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum | ||
| 24606279 | 24606279 | PRJNA312899_P_NODE_80440_length_178_cov_1.240310_g79998_i0 | PRJNA312899 | 80440 | 178 | 1.24031 | 2.2077518 | Fusobacterium nucleatum | 851 | Bacteria | Bacteria | 313 | 6.259999999999999e-81 | NTclustered | gi|2705007409|gb|CP084122.1| | 851 | g79998 | i0 | 98.315 | 7.56179775280899 | 178 | 3 | 100 | 0 | 1 | 178 | 1873571 | 1873394 | Fusobacterium nucleatum strain KCOM3412 chromosome, complete genome | blastn | 1346 | 313 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;