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contig_metadata

13 rows where analysis = "blastn", bioproject = "PRJNA312899" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 13 ✖

bioproject 1

  • PRJNA312899 · 13 ✖

analysis 1

  • blastn · 13 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1653736 1653736 PRJNA312899_P_NODE_12342_length_538_cov_12.952965_g11915_i0 PRJNA312899 12342 538 12.952965 69.6869517 Chlamydomonas reinhardtii 3055 Plants Plants 337 1.3e-87   NTclustered gi|2082269378|ref|XM_001691529.2| 3055 g11915 i0 79.07 70.9832713754647 516 88 94 15 17 522 1315 810 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_17g703700v5), mRNA blastn 38189 337 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
1654393 1654393 PRJNA312899_P_NODE_4642_length_835_cov_9.936387_g4352_i0 PRJNA312899 4642 835 9.936387 82.96883145 Coccomyxa subellipsoidea 248742 Plants Plants 614 8.539999999999999e-171   NTclustered gi|545374891|ref|XM_005651624.1| 574566 g4352 i0 81.614 71.525748502994 756 125 90 13 86 833 24 773 Coccomyxa subellipsoidea C-169 binding protein 1 partial mRNA blastn 59724 614 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae   Coccomyxaceae Coccomyxa Coccomyxa subellipsoidea
6757238 6757238 PRJNA312899_P_NODE_43086_length_270_cov_2.307692_g42644_i0 PRJNA312899 43086 270 2.307692 6.2307684 Monoraphidium neglectum 145388 Plants Plants 52.8 0.025   NTclustered gi|926783133|ref|XM_014044587.1| 145388 g42644 i0 100 0.103703703703704 28 0 10 0 20 47 1096 1123 Monoraphidium neglectum hypothetical protein mRNA blastn 28 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
7442628 7442628 PRJNA312899_P_NODE_52166_length_239_cov_29.773684_g51724_i0 PRJNA312899 52166 239 29.773684 71.15910476 Desmochloris 138596 Plants Plants 370 5.22e-98   NTclustered gi|371782086|emb|HE610118.1| 138176 g51724 i0 94.915 100.81589958159 236 12 99 0 4 239 992 757 Desmochloris halophila 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain UTEX 2073 blastn 24095 370 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Chlorocystidales Chlorocystidaceae Desmochloris Desmochloris halophila
11857908 11857908 PRJNA312899_P_NODE_27110_length_357_cov_42.711039_g26668_i0 PRJNA312899 27110 357 42.711039 152.47840923 Jenufa perforata 993091 Plants Plants 62.1 5.62e-5   NTclustered gi|1829768140|ref|NC_046779.1| 993091 g26668 i0 92.857 0.495798319327731 42 3 12 0 312 353 575 616 Jenufa perforata culture CAUP:H8101 mitochondrion, complete genome blastn 177 62.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae     Jenufa Jenufa perforata
14408332 14408332 PRJNA312899_P_NODE_34212_length_311_cov_15.324427_g33770_i0 PRJNA312899 34212 311 15.324427 47.65896797 Ulva rigida 75689 Plants Plants 84.2 1.03e-11   NTclustered gi|2017998753|ref|NC_053633.1| 75689 g33770 i0 84.706 9.36655948553055 85 11 27 2 159 241 28694 28778 Ulva rigida strain U112 mitochondrion, complete genome blastn 2913 84.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulvales Ulvaceae Ulva Ulva rigida
15681970 15681970 PRJNA312899_P_NODE_23773_length_385_cov_2.032738_g23331_i0 PRJNA312899 23773 385 2.032738 7.8260413 Chlamydomonas incerta 51695 Plants Plants 217 1.23e-51   NTclustered gi|74272614|gb|DQ122872.1| 51695 g23331 i0 78.098 6.30909090909091 347 72 90 4 41 385 714 370 Chlamydomonas incerta mitochondrial ADP/ATP translocator (ANT) mRNA, complete cds; nuclear gene for mitochondrial product blastn 2429 217 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas incerta
16957431 16957431 PRJNA312899_P_NODE_69674_length_194_cov_2.110345_g69232_i0 PRJNA312899 69674 194 2.110345 4.0940693 Pleurastrum terricola 34116 Plants Plants 357 3.17e-94   NTclustered gi|153805558|ref|NC_009681.1| 34116 g69232 i0 100 1.73711340206186 193 0 99 0 2 194 192321 192129 Leptosira terrestris chloroplast, complete genome blastn 337 357 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Pleurastraceae Pleurastrum Pleurastrum terricola
16957694 16957694 PRJNA312899_P_NODE_85874_length_167_cov_0.864407_g85432_i0 PRJNA312899 85874 167 0.864407 1.44355969 Coelastrella saipanensis 152631 Plants Plants 233 4.6599999999999994e-57   NTclustered gi|1642520538|ref|NC_042181.1| 152631 g85432 i0 97.778 29.3173652694611 135 3 81 0 32 166 110551 110685 Coelastrella saipanensis chloroplast, complete genome blastn 4896 233 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Scenedesmaceae Coelastrella Coelastrella saipanensis
18231151 18231151 PRJNA312899_P_NODE_36615_length_298_cov_15.301205_g36173_i0 PRJNA312899 36615 298 15.301205 45.5975909 Chromochloris zofingiensis 31302 Plants Plants 551 2.239999999999999e-152   NTclustered gi|1008861593|ref|NC_029672.1| 31302 g36173 i0 100 157.929530201342 298 0 100 0 1 298 100836 101133 Chromochloris zofingiensis strain UTEX 56 chloroplast, complete genome blastn 47063 551 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Chromochloridaceae Chromochloris Chromochloris zofingiensis
19505015 19505015 PRJNA312899_P_NODE_15316_length_482_cov_27.016166_g14881_i0 PRJNA312899 15316 482 27.016166 130.21792012 Ulva meridionalis 434723 Plants Plants 457 8.52e-124   NTclustered gi|2264197777|gb|ON402240.1| 434723 g14881 i0 84.058 65.1244813278008 483 68 99 9 2 482 64430 63955 Ulva meridionalis isolate LF008 mitochondrion, complete genome blastn 31390 457 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Ulvales Ulvaceae Ulva Ulva meridionalis
20780965 20780965 PRJNA312899_P_NODE_36597_length_298_cov_49.124498_g36155_i0 PRJNA312899 36597 298 49.124498 146.39100404 uncultured Apatococcus 1229086 Plants Plants 542 1.35e-149   NTclustered gi|1031961068|gb|KX025109.1| 1229086 g36155 i0 100 100.355704697987 293 0 98 0 1 293 1229 1521 Uncultured Apatococcus clone GOGs_K08 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence blastn 29906 542 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae       uncultured Apatococcus
24605482 24605482 PRJNA312899_P_NODE_37100_length_296_cov_5.157895_g36658_i0 PRJNA312899 37100 296 5.157895 15.2673692 Auxenochlorella protothecoides 3075 Plants Plants 99 3.48e-16   NTclustered gi|760448944|ref|XM_011403239.1| 3075 g36658 i0 80.303 0.445945945945946 132 24 44 2 130 260 1590 1460 Auxenochlorella protothecoides T-complex protein 1 subunit alpha partial mRNA blastn 132 99 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;