RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA312615" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA312615 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16956174 16956174 PRJNA312615_P_NODE_6474_length_479_cov_2.453488_g6326_i0 PRJNA312615 6474 479 2.453488 11.75220752 Philodina citrina 468664 Rotifera other_Eukaryota 573 8.049999999999998e-159   NTclustered gi|407227484|emb|FR856884.1| 468664 g6326 i0 89.371 31.7181628392484 461 42 96 7 22 479 1881 2337 Philodina citrina complete mitochondrial genome blastn 15193 573 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina citrina
20779286 20779286 PRJNA312615_P_NODE_13477_length_336_cov_1.268293_g13326_i0 PRJNA312615 13477 336 1.268293 4.26146448 Macrotrachela quadricornifera 104788 Rotifera other_Eukaryota 333 1.01e-86   NTclustered gi|402761729|gb|JX183996.1| 104788 g13326 i0 84.615 2.50297619047619 338 48 100 3 1 336 576 241 Macrotrachela quadricornifera isolate CR ATP synthase F0 subunit 6 (ATP6) gene, partial cds; mitochondrial blastn 841 333 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Macrotrachela Macrotrachela quadricornifera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;