RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA312615" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA312615 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11266866 11266866 PRJNA312615_P_NODE_10929_length_374_cov_1.793846_g10779_i0 PRJNA312615 10929 374 1.793846 6.70898404 Metazoa 33208 Platyhelminthes Platyhelminthes 686 0   NTclustered gi|60687563|gb|AY914894.1| 6182 g10779 i0 99.733 100 374 1 100 0 1 374 9 382 Schistosoma japonicum unknown mRNA blastn 37400 686 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
15680483 15680483 PRJNA312615_P_NODE_11293_length_368_cov_1.040752_g11143_i0 PRJNA312615 11293 368 1.040752 3.82996736 Dicrocoelium dendriticum 57078 Platyhelminthes Platyhelminthes 52.8 0.035   NTclustered gi|687608334|emb|LK508843.1| 57078 g11143 i0 100 0.0760869565217391 28 0 8 0 52 79 538 511 Dicrocoelium dendriticum genome assembly D_dendriticum_Leon_v1_0_4, scaffold DDEL_scaffold0109345 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Plagiorchiida Dicrocoeliidae Dicrocoelium Dicrocoelium dendriticum
23330835 23330835 PRJNA312615_P_NODE_7699_length_442_cov_13.664122_g7549_i0 PRJNA312615 7699 442 13.664122 60.39541924 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 734 0   NTclustered gi|68479954|gb|DQ076149.1| 6182 g7549 i0 96.818 0.995475113122172 440 13 99 1 3 442 450 12 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 440 734 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;