RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA312615" and tax_phylum = "Mollusca"

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tax_superkingdom 1

tax_phylum 1

  • Mollusca · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA312615 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9306645 9306645 PRJNA312615_P_NODE_53348_length_165_cov_2.637931_g53197_i0 PRJNA312615 53348 165 2.637931 4.35258615 Aplysia californica 6500 Mollusca Mollusca 91.6 2.92e-14   NTclustered gi|1897934918|ref|XM_035971617.1| 6500 g53197 i0 91.045 28.5454545454545 67 6 41 0 99 165 1362 1428 PREDICTED: Aplysia californica dynein heavy chain 7, axonemal-like (LOC101846299), mRNA blastn 4710 91.6 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Aplysiida Aplysiidae Aplysia Aplysia californica
11856481 11856481 PRJNA312615_P_NODE_16050_length_306_cov_4.365759_g15899_i0 PRJNA312615 16050 306 4.365759 13.35922254 Littorina saxatilis 31220 Mollusca Mollusca 60.2 1.71e-4   NTclustered gi|2868609750|ref|XM_070343994.1| 31220 g15899 i0 97.143 0.209150326797386 35 1 11 0 272 306 1421 1387 PREDICTED: Littorina saxatilis tubulin beta-4B chain-like (LOC138971279), mRNA blastn 64 60.2 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis
14407341 14407341 PRJNA312615_P_NODE_43272_length_186_cov_1.116788_g43121_i0 PRJNA312615 43272 186 1.116788 2.07722568 Littorina saxatilis 31220 Mollusca Mollusca 215 1.92e-51   NTclustered gi|2868661765|ref|XM_070355016.1| 31220 g43121 i0 90.683 89.247311827957 161 15 87 0 10 170 777 617 PREDICTED: Littorina saxatilis ATP synthase subunit beta, mitochondrial-like (LOC138981875), mRNA blastn 16600 215 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Littorinimorpha Littorinidae Littorina Littorina saxatilis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;