RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA312615" and tax_phylum = "Evosea"

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tax_superkingdom 1

tax_phylum 1

  • Evosea · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA312615 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4205595 4205595 PRJNA312615_P_NODE_41904_length_189_cov_1.450000_g41753_i0 PRJNA312615 41904 189 1.45 2.7405 Heterostelium album 2086695 Evosea other_Eukaryota 56.5 0.001   NTclustered gi|1160571566|ref|XM_020575277.1| 670386 g41753 i0 92.308 0.206349206349206 39 3 21 0 146 184 1534 1572 Polysphondylium pallidum PN500 polyketide synthase partial mRNA blastn 39 56.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Heterostelium Heterostelium album
10582075 10582075 PRJNA312615_P_NODE_28809_length_228_cov_1.301676_g28658_i0 PRJNA312615 28809 228 1.301676 2.96782128 Entamoeba histolytica 5759 Evosea other_Eukaryota 75 4.34e-9   NTclustered gi|183236658|ref|XM_001914464.1| 294381 g28658 i0 82.292 1.30263157894737 96 8 42 6 66 161 942 856 Entamoeba histolytica HM-1:IMSS uncharacterized protein (EHI_033450), partial mRNA blastn 297 75 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;