contig_metadata
18 rows where analysis = "blastn", bioproject = "PRJNA312615" and tax_clade = "core chlorophytes"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 378696 | 378696 | PRJNA312615_P_NODE_57561_length_162_cov_0.920354_g57410_i0 | PRJNA312615 | 57561 | 162 | 0.920354 | 1.49097348 | Coccomyxa subellipsoidea | 248742 | Plants | Plants | 100 | 4.75e-17 | NTclustered | gi|545376489|ref|XM_005652272.1| | 574566 | g57410 | i0 | 89.024 | 0.506172839506173 | 82 | 7 | 51 | 2 | 67 | 148 | 969 | 890 | Coccomyxa subellipsoidea C-169 CSD-domain-containing protein partial mRNA | blastn | 82 | 100 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Coccomyxaceae | Coccomyxa | Coccomyxa subellipsoidea | ||
| 1652756 | 1652756 | PRJNA312615_P_NODE_21662_length_262_cov_1.197183_g21511_i0 | PRJNA312615 | 21662 | 262 | 1.197183 | 3.13661946 | Coccomyxa subellipsoidea | 248742 | Plants | Plants | 169 | 2.27e-37 | NTclustered | gi|545370858|ref|XM_005649977.1| | 574566 | g21511 | i0 | 80.822 | 32.7748091603053 | 219 | 38 | 83 | 3 | 26 | 242 | 971 | 1187 | Coccomyxa subellipsoidea C-169 26S proteasome subunit P45 mRNA | blastn | 8587 | 169 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Coccomyxaceae | Coccomyxa | Coccomyxa subellipsoidea | ||
| 1653534 | 1653534 | PRJNA312615_P_NODE_6142_length_491_cov_2.755656_g5994_i0 | PRJNA312615 | 6142 | 491 | 2.755656 | 13.53027096 | Monoraphidium neglectum | 145388 | Plants | Plants | 333 | 1.53e-86 | NTclustered | gi|926773763|ref|XM_014039902.1| | 145388 | g5994 | i0 | 81.308 | 60.4012219959267 | 428 | 64 | 86 | 14 | 52 | 471 | 420 | 1 | Monoraphidium neglectum 60S ribosomal protein L19-2 mRNA | blastn | 29657 | 333 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Selenastraceae | Monoraphidium | Monoraphidium neglectum | |
| 5481916 | 5481916 | PRJNA312615_P_NODE_44845_length_182_cov_1.225564_g44694_i0 | PRJNA312615 | 44845 | 182 | 1.225564 | 2.23052648 | Chlamydomonas reinhardtii | 3055 | Plants | Plants | 106 | 1.17e-18 | NTclustered | gi|2082260798|ref|XM_001697008.2| | 3055 | g44694 | i0 | 92 | 1.54945054945055 | 75 | 6 | 41 | 0 | 46 | 120 | 957 | 1031 | Chlamydomonas reinhardtii uncharacterized protein (CHLRE_12g520500v5), mRNA | blastn | 282 | 106 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 6755853 | 6755853 | PRJNA312615_P_NODE_31966_length_216_cov_2.113772_g31815_i0 | PRJNA312615 | 31966 | 216 | 2.113772 | 4.56574752 | Chlamydomonas reinhardtii | 3055 | Plants | Plants | 235 | 1.7599999999999998e-57 | NTclustered | gi|2082248650|ref|XM_043063418.1| | 3055 | g31815 | i0 | 87.019 | 98.2777777777778 | 208 | 27 | 96 | 0 | 9 | 216 | 617 | 824 | Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g290950v5), mRNA | blastn | 21228 | 235 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 8716796 | 8716796 | PRJNA312615_P_NODE_53067_length_166_cov_0.871795_g52916_i0 | PRJNA312615 | 53067 | 166 | 0.871795 | 1.4471797 | Chlorellales | 35460 | Plants | Plants | 191 | 2.82e-44 | NTclustered | gi|13486625|dbj|AB058647.1| | 3077 | g52916 | i0 | 90.476 | 12.7469879518072 | 147 | 11 | 87 | 1 | 13 | 156 | 488 | 342 | Chlorella vulgaris rbcS mRNA for ribulose-1,5-bisphosphate carboxylase small subunit, complete cds | blastn | 2116 | 191 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Chlorella | Chlorella vulgaris | |
| 10581846 | 10581846 | PRJNA312615_P_NODE_18429_length_284_cov_1.672340_g18278_i0 | PRJNA312615 | 18429 | 284 | 1.67234 | 4.7494456 | Chlamydomonas reinhardtii | 3055 | Plants | Plants | 58.4 | 5.64e-4 | NTclustered | gi|2082238366|ref|XM_043059241.1| | 3055 | g18278 | i0 | 89.13 | 0.161971830985915 | 46 | 5 | 16 | 0 | 93 | 138 | 1511 | 1556 | Chlamydomonas reinhardtii uncharacterized protein (CHLRE_02g081250v5), mRNA | blastn | 46 | 58.4 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 10582761 | 10582761 | PRJNA312615_P_NODE_8269_length_428_cov_3.303430_g8119_i0 | PRJNA312615 | 8269 | 428 | 3.30343 | 14.1386804 | Chlorella variabilis | 554065 | Plants | Plants | 479 | 1.5999999999999996e-130 | NTclustered | gi|552844675|ref|XM_005851082.1| | 554065 | g8119 | i0 | 92.988 | 76.4345794392523 | 328 | 23 | 77 | 0 | 1 | 328 | 416 | 89 | Chlorella variabilis alpha-tubulin (CHLNCDRAFT_33793) mRNA, complete cds | blastn | 32714 | 479 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Chlorella | Chlorella variabilis | |
| 13132332 | 13132332 | PRJNA312615_P_NODE_50891_length_167_cov_1.762712_g50740_i0 | PRJNA312615 | 50891 | 167 | 1.762712 | 2.94372904 | Coccomyxa subellipsoidea | 248742 | Plants | Plants | 169 | 1.33e-37 | NTclustered | gi|545362831|ref|XM_005646559.1| | 574566 | g50740 | i0 | 85.03 | 1.34730538922156 | 167 | 23 | 99 | 2 | 2 | 167 | 316 | 151 | Coccomyxa subellipsoidea C-169 hypothetical protein partial mRNA | blastn | 225 | 169 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Coccomyxaceae | Coccomyxa | Coccomyxa subellipsoidea | ||
| 15680911 | 15680911 | PRJNA312615_P_NODE_2933_length_668_cov_6.148627_g2801_i0 | PRJNA312615 | 2933 | 668 | 6.148627 | 41.07282836 | Chlamydomonas reinhardtii | 3055 | Plants | Plants | 335 | 5.9e-87 | NTclustered | gi|2082248650|ref|XM_043063418.1| | 3055 | g2801 | i0 | 77.526 | 72.8622754491018 | 574 | 117 | 85 | 11 | 81 | 648 | 857 | 290 | Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g290950v5), mRNA | blastn | 48672 | 335 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 18230539 | 18230539 | PRJNA312615_P_NODE_9135_length_408_cov_6.052925_g8985_i0 | PRJNA312615 | 9135 | 408 | 6.052925 | 24.695934 | Chlamydomonas incerta | 51695 | Plants | Plants | 300 | 1.27e-76 | NTclustered | gi|74272606|gb|DQ122868.1| | 51695 | g8985 | i0 | 84.026 | 76.2377450980392 | 313 | 48 | 76 | 2 | 31 | 342 | 345 | 34 | Chlamydomonas incerta 40S ribosomal protein S3 mRNA, complete cds | blastn | 31105 | 300 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas incerta | |
| 19503881 | 19503881 | PRJNA312615_P_NODE_19076_length_279_cov_1.552174_g18925_i0 | PRJNA312615 | 19076 | 279 | 1.552174 | 4.33056546 | Auxenochlorella protothecoides | 3075 | Plants | Plants | 134 | 8.920000000000001e-27 | NTclustered | gi|760437580|ref|XM_011397557.1| | 3075 | g18925 | i0 | 78.571 | 1.11827956989247 | 210 | 39 | 74 | 5 | 1 | 207 | 270 | 64 | Auxenochlorella protothecoides Transcription factor BTF3 partial mRNA | blastn | 312 | 134 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Auxenochlorella | Auxenochlorella protothecoides | |
| 19504237 | 19504237 | PRJNA312615_P_NODE_3456_length_625_cov_3.989583_g3318_i0 | PRJNA312615 | 3456 | 625 | 3.989583 | 24.93489375 | Monoraphidium neglectum | 145388 | Plants | Plants | 255 | 4.4e-63 | NTclustered | gi|926778303|ref|XM_014042172.1| | 145388 | g3318 | i0 | 78.019 | 49.1296 | 414 | 85 | 66 | 5 | 57 | 467 | 25 | 435 | Monoraphidium neglectum 40S ribosomal protein S18 mRNA | blastn | 30706 | 255 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Sphaeropleales | Selenastraceae | Monoraphidium | Monoraphidium neglectum | |
| 19504301 | 19504301 | PRJNA312615_P_NODE_37796_length_200_cov_0.913907_g37645_i0 | PRJNA312615 | 37796 | 200 | 0.913907 | 1.827814 | Chlamydomonas reinhardtii | 3055 | Plants | Plants | 135 | 1.68e-27 | NTclustered | gi|2082260551|ref|XM_001702928.2| | 3055 | g37645 | i0 | 82.278 | 3.61 | 158 | 26 | 79 | 2 | 17 | 173 | 200 | 356 | Chlamydomonas reinhardtii ribosomal protein S11 (CHLRE_12g514500v5), mRNA | blastn | 722 | 135 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 20779491 | 20779491 | PRJNA312615_P_NODE_21537_length_263_cov_0.906542_g21386_i0 | PRJNA312615 | 21537 | 263 | 0.906542 | 2.38420546 | Auxenochlorella protothecoides | 3075 | Plants | Plants | 135 | 2.32e-27 | NTclustered | gi|760446452|ref|XM_011401993.1| | 3075 | g21386 | i0 | 79.891 | 9.15969581749049 | 184 | 37 | 70 | 0 | 8 | 191 | 315 | 132 | Auxenochlorella protothecoides Isocitrate dehydrogenase [NADP], chloroplastic partial mRNA | blastn | 2409 | 135 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Auxenochlorella | Auxenochlorella protothecoides | |
| 22054488 | 22054488 | PRJNA312615_P_NODE_20338_length_270_cov_1.710407_g20187_i0 | PRJNA312615 | 20338 | 270 | 1.710407 | 4.6180989 | Chlamydomonas reinhardtii | 3055 | Plants | Plants | 250 | 8.18e-62 | NTclustered | gi|18122|emb|X61624.1| | 3055 | g20187 | i0 | 83.712 | 48.837037037037 | 264 | 43 | 98 | 0 | 1 | 264 | 1349 | 1612 | Chlamydomonas reinhardtii atp2 (atpB) mRNA | blastn | 13186 | 250 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii | |
| 23329982 | 23329982 | PRJNA312615_P_NODE_1919_length_788_cov_4.132612_g1800_i0 | PRJNA312615 | 1919 | 788 | 4.132612 | 32.56498256 | Auxenochlorella protothecoides | 3075 | Plants | Plants | 313 | 3.28e-80 | NTclustered | gi|760437194|ref|XM_011397364.1| | 3075 | g1800 | i0 | 81.443 | 32.2652284263959 | 388 | 66 | 49 | 5 | 384 | 768 | 627 | 243 | Auxenochlorella protothecoides 40S ribosomal protein S3a partial mRNA | blastn | 25425 | 313 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Trebouxiophyceae | Chlorellales | Chlorellaceae | Auxenochlorella | Auxenochlorella protothecoides | |
| 24604327 | 24604327 | PRJNA312615_P_NODE_3700_length_609_cov_3.455357_g3561_i0 | PRJNA312615 | 3700 | 609 | 3.455357 | 21.04312413 | Chlamydomonas reinhardtii | 3055 | Plants | Plants | 353 | 1.48e-92 | NTclustered | gi|2082261495|ref|XM_001692933.2| | 3055 | g3561 | i0 | 79.198 | 63.0509031198686 | 524 | 97 | 85 | 10 | 48 | 565 | 929 | 412 | Chlamydomonas reinhardtii ribosomal protein L8 (CHLRE_12g535851v5), mRNA | blastn | 38398 | 353 | 1 | Eukaryota | core chlorophytes | Viridiplantae | Chlorophyta | Chlorophyceae | Chlamydomonadales | Chlamydomonadaceae | Chlamydomonas | Chlamydomonas reinhardtii |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;