contig_metadata
25 rows where analysis = "blastn", bioproject = "PRJNA312107" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 377523 | 377523 | PRJNA312107_P_NODE_14861_length_189_cov_2.721429_g14695_i0 | PRJNA312107 | 14861 | 189 | 2.721429 | 5.14350081 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 268 | 1.4799999999999997e-67 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g14695 | i0 | 92.632 | 202.502645502645 | 190 | 9 | 100 | 3 | 1 | 189 | 1315347 | 1315532 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 38273 | 268 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 1652446 | 1652446 | PRJNA312107_P_NODE_4262_length_341_cov_1.630137_g4096_i0 | PRJNA312107 | 4262 | 341 | 1.630137 | 5.55876717 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 424 | 5.93e-114 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g4096 | i0 | 92.359 | 119.545454545455 | 301 | 17 | 87 | 4 | 45 | 341 | 1316740 | 1316442 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 40765 | 424 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 2928153 | 2928153 | PRJNA312107_P_NODE_11423_length_214_cov_3.951515_g11257_i0 | PRJNA312107 | 11423 | 214 | 3.951515 | 8.4562421 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 318 | 1.68e-82 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g11257 | i0 | 93.458 | 322.14953271028 | 214 | 14 | 100 | 0 | 1 | 214 | 1315881 | 1316094 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 68940 | 318 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 2928177 | 2928177 | PRJNA312107_P_NODE_16023_length_183_cov_1.126866_g15857_i0 | PRJNA312107 | 16023 | 183 | 1.126866 | 2.06216478 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 292 | 8.44e-75 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g15857 | i0 | 95.604 | 267.928961748634 | 182 | 8 | 99 | 0 | 2 | 183 | 2355 | 2174 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 49031 | 292 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 4204719 | 4204719 | PRJNA312107_P_NODE_10804_length_220_cov_1.479532_g10638_i0 | PRJNA312107 | 10804 | 220 | 1.479532 | 3.2549704 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 324 | 3.7399999999999997e-84 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g10638 | i0 | 93.182 | 111.677272727273 | 220 | 15 | 100 | 0 | 1 | 220 | 1316845 | 1317064 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 24569 | 324 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 4204756 | 4204756 | PRJNA312107_P_NODE_17984_length_172_cov_0.975610_g17818_i0 | PRJNA312107 | 17984 | 172 | 0.97561 | 1.6780492 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 244 | 2.22e-60 | NTclustered | gi|2874254096|emb|OY970179.1| | 412056 | g17818 | i0 | 92.442 | 187.720930232558 | 172 | 12 | 100 | 1 | 1 | 172 | 558676 | 558506 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 | blastn | 32288 | 244 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 4204757 | 4204757 | PRJNA312107_P_NODE_18284_length_170_cov_1.719008_g18118_i0 | PRJNA312107 | 18284 | 170 | 1.719008 | 2.9223136 | Prosthecobacter fusiformis | 48464 | Bacteria | Bacteria | 169 | 1.35e-37 | NTclustered | gi|12583974|gb|AF245378.1|AF245378 | 48464 | g18118 | i0 | 88.489 | 166.464705882353 | 139 | 16 | 82 | 0 | 32 | 170 | 1207 | 1069 | Prosthecobacter fusiformis 23S ribosomal RNA gene, partial sequence | blastn | 28299 | 169 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter fusiformis | |
| 6755216 | 6755216 | PRJNA312107_P_NODE_14946_length_189_cov_1.164286_g14780_i0 | PRJNA312107 | 14946 | 189 | 1.164286 | 2.20050054 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 305 | 1.13e-78 | NTclustered | gi|226525339|gb|FJ872375.1| | 156588 | g14780 | i0 | 95.767 | 428.904761904762 | 189 | 8 | 100 | 0 | 1 | 189 | 27241 | 27429 | Uncultured Verrucomicrobia bacterium clone 286 genomic sequence | blastn | 81063 | 305 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 6755321 | 6755321 | PRJNA312107_P_NODE_2866_length_413_cov_1.953297_g2700_i0 | PRJNA312107 | 2866 | 413 | 1.953297 | 8.06711661 | uncultured Opitutales bacterium | 592834 | Bacteria | Bacteria | 580 | 4.09e-161 | NTclustered | gi|2557661280|gb|OR396774.1| | 592834 | g2700 | i0 | 92.048 | 101.489104116223 | 415 | 30 | 100 | 3 | 1 | 413 | 1518 | 1105 | Uncultured Opitutales bacterium clone Md513_unbinned&&k119_619290 16S ribosomal RNA gene, partial sequence | blastn | 41915 | 580 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | uncultured Opitutales bacterium | |||
| 8030917 | 8030917 | PRJNA312107_P_NODE_9067_length_238_cov_1.534392_g8901_i0 | PRJNA312107 | 9067 | 238 | 1.534392 | 3.65185296 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 396 | 8.5699999999999955e-106 | NTclustered | gi|2621704341|emb|OY760937.1| | 2499141 | g8901 | i0 | 96.639 | 242.731092436975 | 238 | 8 | 100 | 0 | 1 | 238 | 3991851 | 3992088 | MAG: Verrucomicrobiae bacterium isolate 066a7682-a1ac-48de-8761-1470dc9e5c3e genome assembly, chromosome: 1 | blastn | 57770 | 396 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 9991783 | 9991783 | PRJNA312107_P_NODE_16888_length_178_cov_1.054264_g16722_i0 | PRJNA312107 | 16888 | 178 | 1.054264 | 1.87658992 | Bacteria | 2 | Bacteria | Bacteria | 307 | 2.91e-79 | NTclustered | gi|1498416|gb|U62845.1|UEU62845 | 50837 | g16722 | i0 | 97.753 | 99.5955056179775 | 178 | 4 | 100 | 0 | 1 | 178 | 527 | 350 | Unidentified eubacterium RB24 16S ribosomal RNA gene, partial sequence | blastn | 17728 | 307 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Limisphaerales | unidentified eubacterium RB24 | |||
| 9991813 | 9991813 | PRJNA312107_P_NODE_9068_length_238_cov_1.513228_g8902_i0 | PRJNA312107 | 9068 | 238 | 1.513228 | 3.60148264 | Prosthecobacter | 48463 | Bacteria | Bacteria | 302 | 1.92e-77 | NTclustered | gi|12583974|gb|AF245378.1|AF245378 | 48464 | g8902 | i0 | 95.263 | 283.752100840336 | 190 | 9 | 80 | 0 | 49 | 238 | 2753 | 2564 | Prosthecobacter fusiformis 23S ribosomal RNA gene, partial sequence | blastn | 67533 | 302 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter fusiformis | |
| 10581609 | 10581609 | PRJNA312107_P_NODE_6429_length_280_cov_2.173160_g6263_i0 | PRJNA312107 | 6429 | 280 | 2.17316 | 6.084848 | Prosthecobacter vanneervenii | 48466 | Bacteria | Bacteria | 375 | 1.3499999999999995e-99 | NTclustered | gi|12583975|gb|AF245379.1|AF245379 | 48466 | g6263 | i0 | 91.367 | 108.914285714286 | 278 | 19 | 98 | 3 | 7 | 280 | 1052 | 776 | Prosthecobacter sp. FC-2 23S ribosomal RNA gene, partial sequence | blastn | 30496 | 375 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter vanneervenii | |
| 11856302 | 11856302 | PRJNA312107_P_NODE_5770_length_295_cov_1.784553_g5604_i0 | PRJNA312107 | 5770 | 295 | 1.784553 | 5.26443135 | Prosthecobacter fusiformis | 48464 | Bacteria | Bacteria | 420 | 6.52e-113 | NTclustered | gi|12583974|gb|AF245378.1|AF245378 | 48464 | g5604 | i0 | 96.109 | 217.189830508475 | 257 | 10 | 87 | 0 | 1 | 257 | 1240 | 984 | Prosthecobacter fusiformis 23S ribosomal RNA gene, partial sequence | blastn | 64071 | 420 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter fusiformis | |
| 14406543 | 14406543 | PRJNA312107_P_NODE_2212_length_467_cov_1.313397_g2046_i0 | PRJNA312107 | 2212 | 467 | 1.313397 | 6.13356399 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 641 | 2.12e-179 | NTclustered | gi|2874254065|emb|OY970130.1| | 412056 | g2046 | i0 | 91.974 | 98.3854389721627 | 461 | 32 | 98 | 5 | 9 | 467 | 5153088 | 5152631 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 | blastn | 45946 | 641 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 16954880 | 16954880 | PRJNA312107_P_NODE_10594_length_222_cov_1.312139_g10428_i0 | PRJNA312107 | 10594 | 222 | 1.312139 | 2.91294858 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 316 | 6.319999999999998e-82 | NTclustered | gi|226525288|gb|FJ872373.1| | 156588 | g10428 | i0 | 95.897 | 93.554054054054 | 195 | 8 | 88 | 0 | 28 | 222 | 16128 | 16322 | Uncultured Verrucomicrobia bacterium clone 118 genomic sequence | blastn | 20769 | 316 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 16954910 | 16954910 | PRJNA312107_P_NODE_17014_length_177_cov_1.460938_g16848_i0 | PRJNA312107 | 17014 | 177 | 1.460938 | 2.58586026 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 311 | 2.23e-80 | NTclustered | gi|226525339|gb|FJ872375.1| | 156588 | g16848 | i0 | 98.305 | 109.152542372881 | 177 | 3 | 100 | 0 | 1 | 177 | 26358 | 26182 | Uncultured Verrucomicrobia bacterium clone 286 genomic sequence | blastn | 19320 | 311 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 18229239 | 18229239 | PRJNA312107_P_NODE_13355_length_200_cov_1.006623_g13189_i0 | PRJNA312107 | 13355 | 200 | 1.006623 | 2.013246 | Luteolibacter sp. | 1962973 | Bacteria | Bacteria | 239 | 1.24e-58 | NTclustered | gi|2836248208|gb|CP121322.1| | 1962973 | g13189 | i0 | 90.96 | 168.815 | 177 | 16 | 89 | 0 | 1 | 177 | 1011049 | 1010873 | MAG: Luteolibacter sp. isolate NCC532_bact_1514 chromosome, complete genome | blastn | 33763 | 239 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter sp. | |
| 19503542 | 19503542 | PRJNA312107_P_NODE_15856_length_184_cov_0.770370_g15690_i0 | PRJNA312107 | 15856 | 184 | 0.77037 | 1.4174808 | Verrucomicrobium spinosum | 2736 | Bacteria | Bacteria | 259 | 8.61e-65 | NTclustered | gi|12583973|gb|AF245377.1| | 240016 | g15690 | i0 | 92.737 | 238.923913043478 | 179 | 13 | 97 | 0 | 6 | 184 | 2743 | 2565 | Verrucomicrobium spinosum 23S ribosomal RNA gene, partial sequence | blastn | 43962 | 259 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobium | Verrucomicrobium spinosum | |
| 19503545 | 19503545 | PRJNA312107_P_NODE_16276_length_181_cov_2.022727_g16110_i0 | PRJNA312107 | 16276 | 181 | 2.022727 | 3.66113587 | Opitutus sp. VeGlc2 | 134634 | Bacteria | Bacteria | 320 | 3.82e-83 | NTclustered | gi|164510706|emb|AJ966885.1| | 134634 | g16110 | i0 | 98.883 | 39.0386740331492 | 179 | 2 | 99 | 0 | 1 | 179 | 2180 | 2358 | Opitutus sp. VeGlc2 16S rRNA gene (partial), 23S rRNA gene, tRNA-Ala gene, tRNA-Ile gene, ITS1 and ITS2, strain DSM 11246 | blastn | 7066 | 320 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. VeGlc2 | |
| 19503550 | 19503550 | PRJNA312107_P_NODE_17976_length_172_cov_1.024390_g17810_i0 | PRJNA312107 | 17976 | 172 | 1.02439 | 1.7619508 | Fontisphaera persica | 2974023 | Bacteria | Bacteria | 222 | 1.04e-53 | NTclustered | gi|2439237958|gb|CP116615.1| | 2974023 | g17810 | i0 | 90.23 | 20.0290697674419 | 174 | 11 | 100 | 6 | 1 | 172 | 3861679 | 3861848 | Fontisphaera persica strain B-154 chromosome, complete genome | blastn | 3445 | 222 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Limisphaerales | Fontisphaeraceae | Fontisphaera | Fontisphaera persica | |
| 22054192 | 22054192 | PRJNA312107_P_NODE_26078_length_162_cov_0.920354_g25912_i0 | PRJNA312107 | 26078 | 162 | 0.920354 | 1.49097348 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 171 | 3.57e-38 | NTclustered | gi|2874254096|emb|OY970179.1| | 412056 | g25912 | i0 | 85.802 | 3.46913580246914 | 162 | 22 | 100 | 1 | 1 | 162 | 556959 | 557119 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 | blastn | 562 | 171 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 22740422 | 22740422 | PRJNA312107_P_NODE_3578_length_370_cov_1.934579_g3412_i0 | PRJNA312107 | 3578 | 370 | 1.934579 | 7.1579423 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 604 | 2.149999999999999e-168 | NTclustered | gi|164510706|emb|AJ966885.1| | 134634 | g3412 | i0 | 96.703 | 99.1945945945946 | 364 | 10 | 98 | 2 | 1 | 363 | 2145 | 1783 | Opitutus sp. VeGlc2 16S rRNA gene (partial), 23S rRNA gene, tRNA-Ala gene, tRNA-Ile gene, ITS1 and ITS2, strain DSM 11246 | blastn | 36702 | 610 | 0.99016393442623 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. VeGlc2 | |
| 24603612 | 24603612 | PRJNA312107_P_NODE_17000_length_177_cov_1.585938_g16834_i0 | PRJNA312107 | 17000 | 177 | 1.585938 | 2.80711026 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 104 | 4.07e-18 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g16834 | i0 | 82.759 | 1.59887005649718 | 116 | 20 | 66 | 0 | 4 | 119 | 189073 | 188958 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 283 | 104 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 25289738 | 25289738 | PRJNA312107_P_NODE_14360_length_192_cov_3.132867_g14194_i0 | PRJNA312107 | 14360 | 192 | 3.132867 | 6.01510464 | Prosthecobacter | 48463 | Bacteria | Bacteria | 331 | 1.9e-86 | NTclustered | gi|183579826|emb|AM905423.1| | 48465 | g14194 | i0 | 97.917 | 278.598958333333 | 192 | 2 | 100 | 2 | 1 | 192 | 1578 | 1767 | Prosthecobacter dejongeii partial 23S rRNA gene, strain DSM12251 | blastn | 53491 | 331 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter dejongeii |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;