RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA312107" and tax_phylum = "Elusimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Elusimicrobiota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA312107 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13131342 13131342 PRJNA312107_P_NODE_20151_length_168_cov_0.873950_g19985_i0 PRJNA312107 20151 168 0.87395 1.468236 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 198 1.7099999999999997e-46   NTclustered gi|2233025045|gb|CP096137.1| 2030800 g19985 i0 91.608 0.851190476190476 143 12 85 0 26 168 3537426 3537568 MAG: Elusimicrobia bacterium isolate JAD_PAG50586_1 chromosome, complete genome blastn 143 198 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium
15680294 15680294 PRJNA312107_P_NODE_10813_length_220_cov_1.309942_g10647_i0 PRJNA312107 10813 220 1.309942 2.8818724 Elusimicrobiota bacterium 2030800 Bacteria Bacteria 276 1.06e-69   NTclustered gi|2233025045|gb|CP096137.1| 2030800 g10647 i0 92.67 369.918181818182 191 14 87 0 30 220 3536925 3537115 MAG: Elusimicrobia bacterium isolate JAD_PAG50586_1 chromosome, complete genome blastn 81382 276 1 Bacteria   Pseudomonadati Elusimicrobiota         Elusimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;