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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA312107" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 10 ✖

tax_clade 1

bioproject 1

  • PRJNA312107 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
377532 377532 PRJNA312107_P_NODE_17221_length_176_cov_1.236220_g17055_i0 PRJNA312107 17221 176 1.23622 2.1757472 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 313 6.1699999999999985e-81   NTclustered gi|1950821269|gb|CP066696.1| 2026720 g17055 i0 98.857 172.346590909091 175 2 99 0 1 175 798979 799153 Candidatus Saccharibacteria bacterium isolate NC_groundwater_1927_Pr3_S-0.2um_48_6 chromosome blastn 30333 313 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
377539 377539 PRJNA312107_P_NODE_18341_length_170_cov_1.388430_g18175_i0 PRJNA312107 18341 170 1.38843 2.360331 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 287 3.58e-73   NTclustered gi|1950821269|gb|CP066696.1| 2026720 g18175 i0 97.059 74.5823529411765 170 5 100 0 1 170 799800 799969 Candidatus Saccharibacteria bacterium isolate NC_groundwater_1927_Pr3_S-0.2um_48_6 chromosome blastn 12679 287 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
5481038 5481038 PRJNA312107_P_NODE_18885_length_169_cov_0.866667_g18719_i0 PRJNA312107 18885 169 0.866667 1.46466723 Candidatus Saccharimonadia bacterium 2890869 Bacteria Bacteria 97.1 6.43e-16   NTclustered gi|2874254002|emb|OY970327.1| 2890869 g18719 i0 85.106 0.556213017751479 94 14 56 0 8 101 143337 143244 MAG: Candidatus Saccharimonadia bacterium isolate MFD01275.bin.c.7 genome assembly, chromosome: 1 blastn 94 97.1 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia       Candidatus Saccharimonadia bacterium
9991799 9991799 PRJNA312107_P_NODE_24248_length_164_cov_0.860870_g24082_i0 PRJNA312107 24248 164 0.86087 1.4118268 Candidatus Saccharimonas 1331051 Bacteria Bacteria 265 1.6199999999999998e-66   NTclustered gi|499052612|gb|CP005957.1| 1332188 g24082 i0 95.732 125.359756097561 164 7 100 0 1 164 696963 696800 Candidatus Saccharimonas aalborgensis isolate TM71 chromosome, complete genome blastn 20559 265 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales Candidatus Saccharimonadaceae Candidatus Saccharimonas Candidatus Saccharimonas aalborgensis
11856209 11856209 PRJNA312107_P_NODE_18310_length_170_cov_1.619835_g18144_i0 PRJNA312107 18310 170 1.619835 2.7537195 Candidatus Saccharibacteria bacterium oral taxon 955 2572087 Bacteria Bacteria 226 7.919999999999998e-55   NTclustered gi|1663049602|gb|CP040008.1| 2572087 g18144 i0 90.643 26.3823529411765 171 14 100 2 1 170 139108 139277 Candidatus Saccharibacteria bacterium oral taxon 955 strain PM004 chromosome, complete genome blastn 4485 226 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium oral taxon 955
13131317 13131317 PRJNA312107_P_NODE_16351_length_181_cov_1.265152_g16185_i0 PRJNA312107 16351 181 1.265152 2.28992512 uncultured Candidatus Saccharibacteria bacterium 179883 Bacteria Bacteria 263 6.519999999999999e-66   NTclustered gi|619533766|dbj|AB862054.1| 179883 g16185 i0 93.296 99.7348066298343 179 11 98 1 1 178 707 885 Uncultured Candidatus Saccharibacteria bacterium gene for 16S ribosomal RNA, partial sequence, clone: EBM-E9 blastn 18052 263 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         uncultured Candidatus Saccharibacteria bacterium
16954906 16954906 PRJNA312107_P_NODE_16674_length_179_cov_1.323077_g16508_i0 PRJNA312107 16674 179 1.323077 2.36830783 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 1619070 Bacteria Bacteria 246 6.48e-61   NTclustered gi|837350690|gb|CP011211.1| 1619070 g16508 i0 92.529 236.173184357542 174 9 97 4 1 174 851032 851201 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome blastn 42275 246 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
18229339 18229339 PRJNA312107_P_NODE_26095_length_162_cov_0.920354_g25929_i0 PRJNA312107 26095 162 0.920354 1.49097348 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 1619070 Bacteria Bacteria 185 1.2699999999999999e-42   NTclustered gi|837350690|gb|CP011211.1| 1619070 g25929 i0 87.975 12.3827160493827 158 17 97 2 6 162 850101 849945 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome blastn 2006 185 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
18914979 18914979 PRJNA312107_P_NODE_24575_length_163_cov_0.912281_g24409_i0 PRJNA312107 24575 163 0.912281 1.48701803 Candidatus Nanosynbacteraceae 2093822 Bacteria Bacteria 93.5 8.01e-15   NTclustered gi|2306607015|emb|OX335598.1| 2026720 g24409 i0 92.308 10.5705521472393 65 5 40 0 8 72 563565 563501 Candidatus Saccharibacteria bacterium isolate PRJEB56001 genome assembly, chromosome: contig00001 blastn 1723 93.5 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
22054091 22054091 PRJNA312107_P_NODE_15698_length_185_cov_0.764706_g15532_i0 PRJNA312107 15698 185 0.764706 1.4147061 uncultured Candidatus Saccharibacteria bacterium 179883 Bacteria Bacteria 276 8.61e-70   NTclustered gi|2874254068|emb|OY970151.1| 179883 g15532 i0 93.514 33.3351351351351 185 12 100 0 1 185 658614 658430 MAG: uncultured Candidatus Saccharibacteria bacterium isolate MFD00082.bin.2.65 genome assembly, chromosome: 1 blastn 6167 276 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         uncultured Candidatus Saccharibacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;