contig_metadata
12 rows where analysis = "blastn", bioproject = "PRJNA312107" and tax_kingdom = "Fusobacteriati"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2338861 | 2338861 | PRJNA312107_P_NODE_24062_length_164_cov_0.904348_g23896_i0 | PRJNA312107 | 24062 | 164 | 0.904348 | 1.48313072 | Cetobacterium | 180162 | Bacteria | Bacteria | 303 | 3.42e-78 | NTclustered | gi|2666488225|gb|CP143319.1| | 188913 | g23896 | i0 | 100 | 8.37195121951219 | 164 | 0 | 100 | 0 | 1 | 164 | 1909006 | 1908843 | Cetobacterium somerae strain ceto chromosome, complete genome | blastn | 1373 | 303 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 6755195 | 6755195 | PRJNA312107_P_NODE_10906_length_219_cov_1.923529_g10740_i0 | PRJNA312107 | 10906 | 219 | 1.923529 | 4.21252851 | Leptotrichia hongkongensis | 554406 | Bacteria | Bacteria | 405 | 1.29e-108 | NTclustered | gi|1708587163|dbj|AP019846.1| | 554406 | g10740 | i0 | 100 | 222.945205479452 | 219 | 0 | 100 | 0 | 1 | 219 | 70547 | 70765 | Leptotrichia hongkongensis JMUB5056 DNA, complete genome | blastn | 48825 | 405 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hongkongensis | ||
| 8030845 | 8030845 | PRJNA312107_P_NODE_22467_length_165_cov_1.051724_g22301_i0 | PRJNA312107 | 22467 | 165 | 1.051724 | 1.7353446 | Leptotrichia sp. oral taxon 212 | 712357 | Bacteria | Bacteria | 270 | 3.4999999999999993e-68 | NTclustered | gi|922689899|gb|CP012410.1| | 712357 | g22301 | i0 | 96.894 | 484.109090909091 | 161 | 5 | 98 | 0 | 1 | 161 | 805047 | 805207 | Leptotrichia sp. oral taxon 212 strain W10393, complete genome | blastn | 79878 | 270 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia sp. oral taxon 212 | ||
| 9305575 | 9305575 | PRJNA312107_P_NODE_11428_length_214_cov_3.224242_g11262_i0 | PRJNA312107 | 11428 | 214 | 3.224242 | 6.89987788 | Leptotrichia wadei | 157687 | Bacteria | Bacteria | 390 | 3.519999999999999e-104 | NTclustered | gi|1708582457|dbj|AP019841.1| | 157687 | g11262 | i0 | 99.533 | 169.102803738318 | 214 | 1 | 100 | 0 | 1 | 214 | 1756459 | 1756672 | Leptotrichia wadei JMUB3936 DNA, complete genome | blastn | 36188 | 390 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia wadei | ||
| 11856282 | 11856282 | PRJNA312107_P_NODE_25130_length_163_cov_0.912281_g24964_i0 | PRJNA312107 | 25130 | 163 | 0.912281 | 1.48701803 | Cetobacterium somerae | 188913 | Bacteria | Bacteria | 255 | 9.65e-64 | NTclustered | gi|2201062198|gb|CP092520.1| | 188913 | g24964 | i0 | 95.597 | 7.03067484662577 | 159 | 7 | 98 | 0 | 4 | 162 | 221340 | 221182 | Cetobacterium somerae strain CS2105-BJ plasmid unnamed1, complete sequence | blastn | 1146 | 255 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 15091355 | 15091355 | PRJNA312107_P_NODE_5112_length_312_cov_4.068441_g4946_i0 | PRJNA312107 | 5112 | 312 | 4.068441 | 12.69353592 | Fusobacterium | 848 | Bacteria | Bacteria | 555 | 1.8199999999999994e-153 | NTclustered | gi|2705020071|gb|CP084132.1| | 851 | g4946 | i0 | 98.718 | 482.516025641026 | 312 | 4 | 100 | 0 | 1 | 312 | 107623 | 107934 | Fusobacterium nucleatum strain KCOM3713 chromosome, complete genome | blastn | 150545 | 555 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium nucleatum | ||
| 16955021 | 16955021 | PRJNA312107_P_NODE_9894_length_229_cov_1.100000_g9728_i0 | PRJNA312107 | 9894 | 229 | 1.1 | 2.519 | Leptotrichia hongkongensis | 554406 | Bacteria | Bacteria | 351 | 1.8e-92 | NTclustered | gi|1708587163|dbj|AP019846.1| | 554406 | g9728 | i0 | 94.348 | 453.039301310044 | 230 | 11 | 100 | 2 | 1 | 229 | 72783 | 73011 | Leptotrichia hongkongensis JMUB5056 DNA, complete genome | blastn | 103746 | 351 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hongkongensis | ||
| 18914975 | 18914975 | PRJNA312107_P_NODE_22995_length_165_cov_0.896552_g22829_i0 | PRJNA312107 | 22995 | 165 | 0.896552 | 1.4793108 | Cetobacterium | 180162 | Bacteria | Bacteria | 305 | 9.59e-79 | NTclustered | gi|2865368125|gb|CP122294.1| | 188913 | g22829 | i0 | 100 | 11.8909090909091 | 165 | 0 | 100 | 0 | 1 | 165 | 544815 | 544979 | Cetobacterium somerae strain MSU41 plasmid p41_t2, complete sequence | blastn | 1962 | 305 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Cetobacterium | Cetobacterium somerae | ||
| 18914985 | 18914985 | PRJNA312107_P_NODE_4175_length_344_cov_1.837288_g4009_i0 | PRJNA312107 | 4175 | 344 | 1.837288 | 6.32027072 | Fusobacterium | 848 | Bacteria | Bacteria | 619 | 7.109999999999999e-173 | NTclustered | gi|1370537877|gb|CP028108.1| | 860 | g4009 | i0 | 99.128 | 472.982558139535 | 344 | 3 | 100 | 0 | 1 | 344 | 462728 | 463071 | Fusobacterium periodonticum strain 2_1_31 chromosome, complete genome | blastn | 162706 | 625 | 0.9904 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium periodonticum | ||
| 19503585 | 19503585 | PRJNA312107_P_NODE_21496_length_166_cov_0.888889_g21330_i0 | PRJNA312107 | 21496 | 166 | 0.888889 | 1.47555574 | Fusobacterium animalis | 76859 | Bacteria | Bacteria | 296 | 5.82e-76 | NTclustered | gi|2706511199|gb|CP085045.1| | 76859 | g21330 | i0 | 98.795 | 99.433734939759 | 166 | 2 | 100 | 0 | 1 | 166 | 2431503 | 2431668 | Fusobacterium animalis strain KCOM1279 chromosome, complete genome | blastn | 16506 | 296 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium animalis | ||
| 22054108 | 22054108 | PRJNA312107_P_NODE_18078_length_171_cov_1.704918_g17912_i0 | PRJNA312107 | 18078 | 171 | 1.704918 | 2.91540978 | Leptotrichia hongkongensis | 554406 | Bacteria | Bacteria | 305 | 9.96e-79 | NTclustered | gi|1708587163|dbj|AP019846.1| | 554406 | g17912 | i0 | 98.83 | 155.836257309942 | 171 | 2 | 100 | 0 | 1 | 171 | 1624325 | 1624495 | Leptotrichia hongkongensis JMUB5056 DNA, complete genome | blastn | 26648 | 305 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Leptotrichiaceae | Leptotrichia | Leptotrichia hongkongensis | ||
| 25289776 | 25289776 | PRJNA312107_P_NODE_9220_length_236_cov_1.647059_g9054_i0 | PRJNA312107 | 9220 | 236 | 1.647059 | 3.88705924 | Fusobacterium | 848 | Bacteria | Bacteria | 431 | 2.33e-116 | NTclustered | gi|2078816781|gb|CP071094.1| | 76857 | g9054 | i0 | 99.576 | 476.96186440678 | 236 | 1 | 100 | 0 | 1 | 236 | 465213 | 464978 | Fusobacterium polymorphum strain THCT15E1 chromosome, complete genome | blastn | 112563 | 431 | 1 | Bacteria | Fusobacteriati | Fusobacteriota | Fusobacteriia | Fusobacteriales | Fusobacteriaceae | Fusobacterium | Fusobacterium polymorphum |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;