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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA312107" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 10 ✖

bioproject 1

  • PRJNA312107 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4204855 4204855 PRJNA312107_P_NODE_26524_length_158_cov_2.064220_g26358_i0 PRJNA312107 26524 158 2.06422 3.2614676 Vannella septentrionalis 197531 Discosea other_Eukaryota 243 7.219999999999999e-60   NTclustered gi|300078499|gb|GU001161.1| 197531 g26358 i0 94.34 48.126582278481 159 8 100 1 1 158 3472 3630 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 7604 243 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
5481151 5481151 PRJNA312107_P_NODE_9205_length_236_cov_2.390374_g9039_i0 PRJNA312107 9205 236 2.390374 5.64128264 Vannella septentrionalis 197531 Discosea other_Eukaryota 322 1.46e-83   NTclustered gi|300078499|gb|GU001161.1| 197531 g9039 i0 91.561 56.0254237288136 237 15 100 3 1 236 1641 1873 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 13222 322 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
12542148 12542148 PRJNA312107_P_NODE_5350_length_306_cov_1.599222_g5184_i0 PRJNA312107 5350 306 1.599222 4.89361932 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 294 4.29e-75   NTclustered gi|300078500|gb|GU001162.1| 136499 g5184 i0 90.541 72.9313725490196 222 21 73 0 85 306 2151 2372 Phalansterium solitarium 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 22317 294 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium solitarium
15680379 15680379 PRJNA312107_P_NODE_22693_length_165_cov_0.896552_g22527_i0 PRJNA312107 22693 165 0.896552 1.4793108 Entamoeba dispar 46681 Evosea other_Eukaryota 52.8 0.014   NTclustered gi|167394131|ref|XM_001740811.1| 370354 g22527 i0 94.286 0.212121212121212 35 1 21 1 126 159 605 571 Entamoeba dispar SAW760 stress 70 protein chaperone microsome-associated 60 kDa protein precursor, putative (EDI_103420), partial mRNA blastn 35 52.8 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba dispar
15680445 15680445 PRJNA312107_P_NODE_9413_length_234_cov_1.113514_g9247_i0 PRJNA312107 9413 234 1.113514 2.60562276 Vannella septentrionalis 197531 Discosea other_Eukaryota 331 2.4e-86   NTclustered gi|300078499|gb|GU001161.1| 197531 g9247 i0 92.116 63.9230769230769 241 9 100 6 1 234 2671 2908 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 14958 331 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
16954970 16954970 PRJNA312107_P_NODE_23234_length_165_cov_0.896552_g23068_i0 PRJNA312107 23234 165 0.896552 1.4793108 Thecamoeba foliovenanda 2653195 Discosea other_Eukaryota 300 4.46e-77   NTclustered gi|2027879228|gb|MW970089.1| 2653195 g23068 i0 99.394 80.2 165 1 100 0 1 165 586 422 Thecamoeba foliovenanda strain Tfol_RM small subunit ribosomal RNA gene, partial sequence blastn 13233 300 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Thecamoeba Thecamoeba foliovenanda
20779153 20779153 PRJNA312107_P_NODE_23697_length_164_cov_0.904348_g23531_i0 PRJNA312107 23697 164 0.904348 1.48313072 Didymium iridis 5793 Evosea other_Eukaryota 204 3.5699999999999997e-48   NTclustered gi|2687|emb|X60210.1| 5793 g23531 i0 90.789 2.78048780487805 152 14 93 0 3 154 2333 2484 D.iridis LSU rRNA gene blastn 456 204 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium iridis
22740430 22740430 PRJNA312107_P_NODE_9798_length_230_cov_1.187845_g9632_i0 PRJNA312107 9798 230 1.187845 2.7320435 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 357 3.89e-94   NTclustered gi|399764264|gb|JQ271775.1| 1215986 g9632 i0 94.805 86.8304347826087 231 9 100 3 1 230 954 1182 Tubulinea group 02 sp. 1HFKJ 18S ribosomal RNA gene, partial sequence blastn 19971 357 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea group 02 sp. 1HFKJ
23329626 23329626 PRJNA312107_P_NODE_18159_length_171_cov_1.213115_g17993_i0 PRJNA312107 18159 171 1.213115 2.07442665 Vannella septentrionalis 197531 Discosea other_Eukaryota 134 4.97e-27   NTclustered gi|300078499|gb|GU001161.1| 197531 g17993 i0 84.211 1.33918128654971 133 18 77 3 1 131 4224 4355 Vannella septentrionalis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 229 134 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella septentrionalis
23329628 23329628 PRJNA312107_P_NODE_18459_length_169_cov_2.091667_g18293_i0 PRJNA312107 18459 169 2.091667 3.53491723 Tubulinea sp. 4388 1216001 Tubulinea other_Eukaryota 313 5.859999999999999e-81   NTclustered gi|399764265|gb|JQ271776.1| 1216001 g18293 i0 100 4 169 0 100 0 1 169 125 293 Tubulinea sp. 4388 18S ribosomal RNA gene, partial sequence blastn 676 313 1 Eukaryota Amoebozoa   Tubulinea         Tubulinea sp. 4388

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;