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contig_metadata

11 rows where analysis = "blastn", bioproject = "PRJNA309466" and tax_clade = "Discoba"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 11 ✖

bioproject 1

  • PRJNA309466 · 11 ✖

analysis 1

  • blastn · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
376838 376838 PRJNA309466_P_NODE_5821_length_242_cov_8.119171_g5764_i0 PRJNA309466 5821 242 8.119171 19.64839382 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 316 7e-82   NTclustered gi|2026667531|dbj|LC618031.1| 67003 g5764 i0 92.76 110.03305785124 221 12 90 4 3 220 5773 5992 Trypanosoma theileri OSK-16 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, partial and complete sequence blastn 26628 316 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
4203936 4203936 PRJNA309466_P_NODE_12704_length_182_cov_5.090226_g12647_i0 PRJNA309466 12704 182 5.090226 9.26421132 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 285 1.4e-72   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g12647 i0 96 1.93956043956044 175 7 96 0 5 179 2172 1998 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 353 285 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
7440861 7440861 PRJNA309466_P_NODE_10366_length_197_cov_1.371622_g10309_i0 PRJNA309466 10366 197 1.371622 2.70209534 Naegleria 5761 Heterolobosea other_Eukaryota 355 1.16e-93   NTclustered gi|2618963742|gb|OR769034.1| 5762 g10309 i0 100 9.97969543147208 192 0 97 0 6 197 5719 5528 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 1966 355 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
8030060 8030060 PRJNA309466_P_NODE_19227_length_155_cov_5.622642_g19170_i0 PRJNA309466 19227 155 5.622642 8.7150951 Monomorphina pseudonordstedti 298287 Euglenozoa other_Eukaryota 265 1.5e-66   NTclustered gi|397789470|gb|JN603976.1| 298287 g19170 i0 98.667 96.6516129032258 150 1 96 1 4 152 1267 1416 Monomorphina pseudonordstedti strain Doomo042007H 23S large subunit ribosomal RNA gene, partial sequence; plastid blastn 14981 265 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Euglenaceae Monomorphina Monomorphina pseudonordstedti
8030068 8030068 PRJNA309466_P_NODE_2767_length_384_cov_10.910448_g2711_i0 PRJNA309466 2767 384 10.910448 41.89612032 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 612 1.34e-170   NTclustered gi|2026667531|dbj|LC618031.1| 67003 g2711 i0 95.373 149.393229166667 389 11 99 6 2 383 4783 4395 Trypanosoma theileri OSK-16 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, partial and complete sequence blastn 57367 612 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
9991267 9991267 PRJNA309466_P_NODE_19868_length_151_cov_10.245098_g19811_i0 PRJNA309466 19868 151 10.245098 15.47009798 Bodo 5712 Euglenozoa other_Eukaryota 279 5.19e-71   NTclustered gi|1509798611|gb|MH614643.1| 75058 g19811 i0 100 99.158940397351 151 0 100 0 1 151 1884 2034 Bodo saltans small subunit ribosomal RNA gene, partial sequence blastn 14973 279 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
10580786 10580786 PRJNA309466_P_NODE_18929_length_157_cov_4.759259_g18872_i0 PRJNA309466 18929 157 4.759259 7.47203663 Bodo edax 155204 Euglenozoa other_Eukaryota 274 2.54e-69   NTclustered gi|20331093|gb|AY028451.1| 155204 g18872 i0 98.701 98.2356687898089 154 2 98 0 1 154 2328 2481 Bodo edax 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 15423 274 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo edax
15090790 15090790 PRJNA309466_P_NODE_3252_length_337_cov_10.583333_g3196_i0 PRJNA309466 3252 337 10.583333 35.66583221 Bodo 5712 Euglenozoa other_Eukaryota 619 6.95e-173   NTclustered gi|45739069|gb|AY490227.1| 75058 g3196 i0 100 97.7655786350148 335 0 99 0 2 336 1044 1378 Bodo saltans JC02 18S ribosomal RNA gene, partial sequence blastn 32947 619 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
15090924 15090924 PRJNA309466_P_NODE_8572_length_210_cov_9.459627_g8515_i0 PRJNA309466 8572 210 9.459627 19.8652167 Bodo 5712 Euglenozoa other_Eukaryota 385 1.5999999999999995e-102   NTclustered gi|45739069|gb|AY490227.1| 75058 g8515 i0 100 96.2761904761905 208 0 99 0 1 208 632 425 Bodo saltans JC02 18S ribosomal RNA gene, partial sequence blastn 20218 385 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
17640747 17640747 PRJNA309466_P_NODE_3034_length_358_cov_4.294498_g2978_i0 PRJNA309466 3034 358 4.294498 15.37430284 Bodo 5712 Euglenozoa other_Eukaryota 592 1.6199999999999999e-164   NTclustered gi|45739068|gb|AY490226.1| 75058 g2978 i0 99.689 88.6703910614525 322 1 90 0 37 358 1514 1835 Bodo saltans 18S ribosomal RNA gene, partial sequence blastn 31744 592 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans
24602912 24602912 PRJNA309466_P_NODE_3700_length_306_cov_2.797665_g3644_i0 PRJNA309466 3700 306 2.797665 8.5608549 Bodo saltans 75058 Euglenozoa other_Eukaryota 527 3.8899999999999985e-145   NTclustered gi|68271530|gb|DQ086711.1| 75058 g3644 i0 97.712 161.359477124183 306 7 100 0 1 306 637 332 Bodo saltans isolate BODOSALT large subunit ribosomal RNA gene, partial sequence blastn 49376 527 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae Bodo Bodo saltans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;