RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA309466" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA309466 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10580821 10580821 PRJNA309466_P_NODE_5669_length_245_cov_9.469388_g5612_i0 PRJNA309466 5669 245 9.469388 23.2000006 Candidatus Chromulinivorax destructor 2066483 Bacteria Bacteria 217 7.41e-52   NTclustered gi|1443103054|gb|CP025544.1| 2066483 g5612 i0 82.787 4.91428571428571 244 40 99 2 1 243 664459 664701 Candidatus Chromulinivorax destructor strain SeV1 chromosome, complete genome blastn 1204 217 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales Candidatus Chromulinivoraceae Candidatus Chromulinivorax Candidatus Chromulinivorax destructor
11855533 11855533 PRJNA309466_P_NODE_9450_length_203_cov_5.032468_g9393_i0 PRJNA309466 9450 203 5.032468 10.21591004 Candidatus Chromulinivorax destructor 2066483 Bacteria Bacteria 300 5.72e-77   NTclustered gi|1443103054|gb|CP025544.1| 2066483 g9393 i0 93.939 112.133004926108 198 12 98 0 2 199 663721 663918 Candidatus Chromulinivorax destructor strain SeV1 chromosome, complete genome blastn 22763 300 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales Candidatus Chromulinivoraceae Candidatus Chromulinivorax Candidatus Chromulinivorax destructor
15679509 15679509 PRJNA309466_P_NODE_12173_length_185_cov_2.272059_g12116_i0 PRJNA309466 12173 185 2.272059 4.20330915 Candidatus Babela massiliensis 673862 Bacteria Bacteria 327 2.34e-85   NTclustered gi|563405083|emb|HG793133.1| 673862 g12116 i0 99.444 147.043243243243 180 1 97 0 1 180 500198 500377 Candidatus Babela massiliensis strain BABL1 complete genome blastn 27203 327 1 Bacteria Bacteria candidate phyla     Candidatus Babeliae Candidatus Babeliales Candidatus Babeliaceae Candidatus Babela Candidatus Babela massiliensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;