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contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJNA306153" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 17 ✖

tax_clade 1

bioproject 1

  • PRJNA306153 · 17 ✖

analysis 1

  • blastn · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2337497 2337497 PRJNA306153_S_NODE_1262_length_214_cov_10.259459_g1249_i0 PRJNA306153 1262 214 10.259459 21.95524226 Naegleria 5761 Heterolobosea other_Eukaryota 392 9.78e-105   NTclustered gi|2476253407|gb|OQ627480.1| 51634 g1249 i0 100 26.0514018691589 212 0 99 0 3 214 5063 4852 Naegleria australiensis strain PP397 rDNA-containing extrachromosomal element genomic sequence; small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 5575 392 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
2337503 2337503 PRJNA306153_S_NODE_882_length_254_cov_6.822222_g869_i0 PRJNA306153 882 254 6.822222 17.32844388 Naegleria 5761 Heterolobosea other_Eukaryota 459 1.1599999999999999e-124   NTclustered gi|2618963742|gb|OR769034.1| 5762 g869 i0 99.213 45.8188976377953 254 2 100 0 1 254 5352 5099 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 11638 459 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
6165008 6165008 PRJNA306153_S_NODE_1305_length_211_cov_11.846154_g1292_i0 PRJNA306153 1305 211 11.846154 24.99538494 Naegleria 5761 Heterolobosea other_Eukaryota 390 3.459999999999999e-104   NTclustered gi|2618963742|gb|OR769034.1| 5762 g1292 i0 100 29.3838862559242 211 0 100 0 1 211 3628 3838 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 6200 390 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
6165009 6165009 PRJNA306153_S_NODE_1625_length_192_cov_7.957055_g1612_i0 PRJNA306153 1625 192 7.957055 15.2775456 Naegleria 5761 Heterolobosea other_Eukaryota 350 5.24e-92   NTclustered gi|32479131|gb|AY321362.1| 51634 g1612 i0 99.479 99.8177083333333 192 1 100 0 1 192 777 968 Naegleria australiensis isolate TT 18S ribosomal RNA gene, partial sequence blastn 19165 350 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
9304423 9304423 PRJNA306153_S_NODE_2808_length_150_cov_2.842975_g2795_i0 PRJNA306153 2808 150 2.842975 4.2644625 Naegleria lovaniensis 51637 Heterolobosea other_Eukaryota 182 1.49e-41   NTclustered gi|2119449339|ref|XM_044698046.1| 51637 g2795 i0 91.729 89.68 133 7 86 2 19 147 1310 1178 Naegleria lovaniensis uncharacterized protein (C9374_008016), partial mRNA blastn 13452 182 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria lovaniensis
9990398 9990398 PRJNA306153_S_NODE_1488_length_199_cov_10.882353_g1475_i0 PRJNA306153 1488 199 10.882353 21.65588247 Naegleria 5761 Heterolobosea other_Eukaryota 368 1.51e-97   NTclustered gi|2618963742|gb|OR769034.1| 5762 g1475 i0 100 14.3718592964824 199 0 100 0 1 199 3596 3398 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 2860 368 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
10580293 10580293 PRJNA306153_S_NODE_1709_length_188_cov_7.251572_g1696_i0 PRJNA306153 1709 188 7.251572 13.63295536 Naegleria sp. Cn14 339151 Heterolobosea other_Eukaryota 346 6.6e-91   NTclustered gi|222352807|emb|AM062727.1| 339151 g1696 i0 100 98.8829787234042 187 0 99 0 2 188 265 451 Naegleria sp. Cn14 18S rRNA gene (partial), 5.8S rRNA gene, ITS1 and ITS2, strain cn14 blastn 18590 346 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria sp. Cn14
14405350 14405350 PRJNA306153_S_NODE_2032_length_174_cov_6.551724_g2019_i0 PRJNA306153 2032 174 6.551724 11.39999976 Naegleria australiensis 51634 Heterolobosea other_Eukaryota 322 1.01e-83   NTclustered gi|2476253407|gb|OQ627480.1| 51634 g2019 i0 100 12.051724137931 174 0 100 0 1 174 2763 2936 Naegleria australiensis strain PP397 rDNA-containing extrachromosomal element genomic sequence; small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 2097 322 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
15679119 15679119 PRJNA306153_S_NODE_1033_length_235_cov_3.626214_g1020_i0 PRJNA306153 1033 235 3.626214 8.5216029 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 390 3.93e-104   NTclustered gi|290988433|ref|XM_002676880.1| 5762 g1020 i0 96.596 76.7148936170213 235 8 100 0 1 235 1297 1063 Naegleria gruberi uncharacterized protein (NAEGRDRAFT_82621), mRNA blastn 18028 390 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
17639906 17639906 PRJNA306153_S_NODE_394_length_357_cov_9.539634_g381_i0 PRJNA306153 394 357 9.539634 34.05649338 Naegleria 5761 Heterolobosea other_Eukaryota 660 0   NTclustered gi|2618963742|gb|OR769034.1| 5762 g381 i0 100 10.1288515406162 357 0 100 0 1 357 5802 5446 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 3616 660 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
19502331 19502331 PRJNA306153_S_NODE_2756_length_151_cov_6.188525_g2743_i0 PRJNA306153 2756 151 6.188525 9.34467275 Naegleria pagei 234920 Heterolobosea other_Eukaryota 279 5.19e-71   NTclustered gi|1121487419|gb|KX069001.1| 234920 g2743 i0 100 100 151 0 100 0 1 151 456 306 Naegleria pagei strain ST-39 18S ribosomal RNA gene, partial sequence blastn 15100 279 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria pagei
20188329 20188329 PRJNA306153_S_NODE_1976_length_176_cov_10.374150_g1963_i0 PRJNA306153 1976 176 10.37415 18.258504 Naegleria 5761 Heterolobosea other_Eukaryota 326 7.92e-85   NTclustered gi|2618963742|gb|OR769034.1| 5762 g1963 i0 100 27.6363636363636 176 0 100 0 1 176 3822 3997 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 4864 326 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
20777893 20777893 PRJNA306153_S_NODE_837_length_261_cov_9.034483_g824_i0 PRJNA306153 837 261 9.034483 23.58000063 Naegleria australiensis 51634 Heterolobosea other_Eukaryota 475 1.1899999999999999e-129   NTclustered gi|2476253407|gb|OQ627480.1| 51634 g824 i0 99.615 29.4521072796935 260 1 99 0 2 261 2695 2436 Naegleria australiensis strain PP397 rDNA-containing extrachromosomal element genomic sequence; small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 7687 475 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
22739051 22739051 PRJNA306153_S_NODE_238_length_436_cov_5.346437_g226_i0 PRJNA306153 238 436 5.346437 23.31046532 Naegleria 5761 Heterolobosea other_Eukaryota 804 0   NTclustered gi|32479131|gb|AY321362.1| 51634 g226 i0 100 97.2454128440367 435 0 99 0 1 435 1425 1859 Naegleria australiensis isolate TT 18S ribosomal RNA gene, partial sequence blastn 42399 804 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
23328383 23328383 PRJNA306153_S_NODE_159_length_501_cov_12.194915_g148_i0 PRJNA306153 159 501 12.194915 61.09652415 Naegleria australiensis 51634 Heterolobosea other_Eukaryota 904 0   NTclustered gi|2476253407|gb|OQ627480.1| 51634 g148 i0 99.202 34.1117764471058 501 4 100 0 1 501 4454 3954 Naegleria australiensis strain PP397 rDNA-containing extrachromosomal element genomic sequence; small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 17090 904 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
25288364 25288364 PRJNA306153_S_NODE_1240_length_215_cov_7.446237_g1227_i0 PRJNA306153 1240 215 7.446237 16.00940955 Naegleria 5761 Heterolobosea other_Eukaryota 375 9.899999999999998e-100   NTclustered gi|2651357780|gb|PP174296.1| 36333 g1227 i0 98.14 42.1162790697674 215 4 100 0 1 215 3885 4099 Naegleria clarki isolate P2881 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 9055 375 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria clarki
25288365 25288365 PRJNA306153_S_NODE_1320_length_210_cov_10.524862_g1307_i0 PRJNA306153 1320 210 10.524862 22.1022102 Naegleria 5761 Heterolobosea other_Eukaryota 388 1.24e-103   NTclustered gi|2618963742|gb|OR769034.1| 5762 g1307 i0 100 80.9571428571429 210 0 100 0 1 210 3174 3383 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 17001 388 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;