RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA306153" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA306153 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1651151 1651151 PRJNA306153_S_NODE_1282_length_213_cov_18.766304_g1269_i0 PRJNA306153 1282 213 18.766304 39.97222752 Diadumene lineata 1789172 Cnidaria other_Eukaryota 67.6 6.69e-7   NTclustered gi|636577273|gb|KJ483107.1| 1789172 g1269 i0 78 0.605633802816901 100 20 46 2 1 98 2623 2722 Haliplanella lineata isolate haja 28S large subunit ribosomal RNA gene and external transcribed spacer, partial sequence blastn 129 67.6 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Actiniaria Diadumenidae Diadumene Diadumene lineata
20777889 20777889 PRJNA306153_S_NODE_2617_length_155_cov_2.730159_g2604_i0 PRJNA306153 2617 155 2.730159 4.23174645 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 100 4.49e-17   NTclustered gi|2782931191|ref|XM_067074155.1| 252671 g2604 i0 78.571 0.993548387096774 154 31 99 2 1 153 655 503 PREDICTED: Clytia hemisphaerica ADP-ribosylation factor 2 (LOC136817831), mRNA blastn 154 100 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;