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contig_metadata

29 rows where analysis = "blastn", bioproject = "PRJNA306153" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 29 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA306153 · 29 ✖

analysis 1

  • blastn · 29 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1062305 1062305 PRJNA306153_S_NODE_1341_length_208_cov_24.854749_g1328_i0 PRJNA306153 1341 208 24.854749 51.69787792 Agaricales 5338 Fungi Fungi 359 9.59e-95   NTclustered gi|1473254945|gb|MH867889.1| 220800 g1328 i0 97.619 100.283653846154 210 3 100 2 1 208 428 637 Mycena cinerella culture CBS:261.48 strain CBS 261.48 large subunit ribosomal RNA gene, partial sequence blastn 20859 359 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Mycenaceae Mycena Mycena cinerella
1062312 1062312 PRJNA306153_S_NODE_2381_length_161_cov_3.363636_g2368_i0 PRJNA306153 2381 161 3.363636 5.41545396 Cystofilobasidium 5410 Fungi Fungi 287 3.37e-73   NTclustered gi|1607193289|gb|MK749769.1| 89913 g2368 i0 98.758 97.5403726708075 161 2 100 0 1 161 512 352 Cystofilobasidium infirmominiatum isolate FKIA004 large subunit ribosomal RNA gene, partial sequence blastn 15704 287 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Cystofilobasidiales Cystofilobasidiaceae Cystofilobasidium Cystofilobasidium infirmominiatum
1062314 1062314 PRJNA306153_S_NODE_2681_length_153_cov_8.040323_g2668_i0 PRJNA306153 2681 153 8.040323 12.30169419 Agaricales 5338 Fungi Fungi 283 4.0799999999999995e-72   NTclustered gi|22022363|gb|AY033137.1| 47422 g2668 i0 100 100 153 0 100 0 1 153 521 369 Cortinarius limonius strain IB19740328 large subunit ribosomal RNA gene, partial sequence blastn 15300 283 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Cortinariaceae Aureonarius Aureonarius limonius
1062319 1062319 PRJNA306153_S_NODE_861_length_256_cov_28.819383_g848_i0 PRJNA306153 861 256 28.819383 73.77762048 Malassezia 55193 Fungi Fungi 462 9.07e-126   NTclustered gi|953821272|gb|KT310070.1| 76773 g848 i0 99.219 93.8515625 256 2 100 0 1 256 430 685 Malassezia globosa isolate 1242 large subunit ribosomal RNA gene, partial sequence blastn 24026 462 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
1651156 1651156 PRJNA306153_S_NODE_302_length_394_cov_8.268493_g290_i0 PRJNA306153 302 394 8.268493 32.57786242 Panellus stipticus 5636 Fungi Fungi 281 4.42e-71   NTclustered gi|2917929599|emb|OZ234887.1| 5636 g290 i0 85.768 63.0659898477157 267 37 68 1 1 267 52489 52754 Panellus stipticus genome assembly, chromosome: 10 blastn 24848 281 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Mycenaceae Panellus Panellus stipticus
1651158 1651158 PRJNA306153_S_NODE_522_length_318_cov_9620.342561_g509_i0 PRJNA306153 522 318 9620.342561 30592.68934398 Dentipellis fragilis 205917 Fungi Fungi 322 2.06e-83   NTclustered gi|1565051531|gb|MK463979.1| 205917 g509 i0 88.764 90.3584905660377 267 25 83 5 1 264 4276 4540 Dentipellis fragilis strain DSM 105465 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 28734 322 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Russulales Hericiaceae Dentipellis Dentipellis fragilis
2337495 2337495 PRJNA306153_S_NODE_1082_length_229_cov_13292.900000_g1069_i0 PRJNA306153 1082 229 13292.9 30440.741 Eukaryota 2759 Fungi Fungi 324 3.92e-84   NTclustered gi|2558627581|gb|OR405830.1| 76775 g1069 i0 100 77.9475982532751 175 0 76 0 1 175 318 492 Malassezia restricta strain GSVCC20Z3-2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1 and 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 17850 324 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
2927032 2927032 PRJNA306153_S_NODE_263_length_415_cov_7143.870466_g251_i0 PRJNA306153 263 415 7143.870466 29647.0624339 Malassezia restricta 76775 Fungi Fungi 505 2.5499999999999995e-138   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g251 i0 92.541 78.5903614457831 362 12 87 11 55 415 3325 2978 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 32615 505 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
2927033 2927033 PRJNA306153_S_NODE_2683_length_153_cov_6.556452_g2670_i0 PRJNA306153 2683 153 6.556452 10.03137156 Simocybe sp. MCA424 163938 Fungi Fungi 283 4.0799999999999995e-72   NTclustered gi|6707454|gb|AF205687.1| 163938 g2670 i0 100 100.895424836601 153 0 100 0 1 153 1 153 Simocybe sp. MCA424 25S ribosomal RNA gene, partial sequence blastn 15437 283 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Crepidotaceae Simocybe Simocybe sp. MCA424
3612781 3612781 PRJNA306153_S_NODE_1083_length_229_cov_343.835000_g1070_i0 PRJNA306153 1083 229 343.835 787.38215 Basidiomycota 5204 Fungi Fungi 189 1.49e-43   NTclustered gi|1393564764|ref|NG_058992.1| 89931 g1070 i0 86.111 78.6943231441048 180 20 77 5 1 177 618 795 Colacogloea foliorum CBS 5234 28S rRNA gene, partial sequence; from TYPE material blastn 18021 189 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes   Colacogloeaceae Colacogloea Colacogloea foliorum
4203531 4203531 PRJNA306153_S_NODE_164_length_496_cov_57.351178_g153_i0 PRJNA306153 164 496 57.351178 284.46184288 Malassezia restricta 76775 Fungi Fungi 900 0   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g153 i0 99.395 105.653225806452 496 3 100 0 1 496 1454 1949 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 52404 900 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
5479837 5479837 PRJNA306153_S_NODE_1065_length_231_cov_361.509901_g1052_i0 PRJNA306153 1065 231 361.509901 835.08787131 Tilletia caries 13290 Fungi Fungi 270 5.2299999999999984e-68   NTclustered gi|2515201701|gb|OR098514.1| 13290 g1052 i0 95.808 70.8571428571429 167 7 72 0 55 221 321 155 Tilletia caries isolate TC3 internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene, complete sequence; and internal transcribed spacer 2, partial sequence blastn 16368 270 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Tilletiales Tilletiaceae Tilletia Tilletia caries
5479842 5479842 PRJNA306153_S_NODE_285_length_402_cov_7400.951743_g273_i0 PRJNA306153 285 402 7400.951743 29751.82600686 Malassezia restricta 76775 Fungi Fungi 643 4.999999999999998e-180   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g273 i0 100 79.4577114427861 348 0 87 0 55 402 3325 2978 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 31942 643 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
6165012 6165012 PRJNA306153_S_NODE_385_length_361_cov_3.250000_g372_i0 PRJNA306153 385 361 3.25 11.7325 Malassezia 55193 Fungi Fungi 667 0   NTclustered gi|1321659621|gb|KY911094.1| 76775 g372 i0 100 60.398891966759 361 0 100 0 1 361 33114 32754 Malassezia restricta mitochondrion, complete genome blastn 21804 667 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
7440225 7440225 PRJNA306153_S_NODE_446_length_339_cov_48.970968_g433_i0 PRJNA306153 446 339 48.970968 166.01158152 Opisthokonta 33154 Fungi Fungi 616 9.05e-172   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g433 i0 99.41 95.834808259587 339 2 100 0 1 339 350 688 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 32488 616 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
8714888 8714888 PRJNA306153_S_NODE_1107_length_227_cov_44.419192_g1094_i0 PRJNA306153 1107 227 44.419192 100.83156584 Agaricomycetes 155619 Fungi Fungi 412 8.05e-111   NTclustered gi|2239095925|gb|ON514595.1| 5321 g1094 i0 99.558 99.5550660792952 226 1 99 0 1 226 39 264 Pleurotus cornucopiae isolate RBS3 small subunit ribosomal RNA gene, partial sequence blastn 22599 412 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Pleurotaceae Pleurotus Pleurotus cornucopiae
9304428 9304428 PRJNA306153_S_NODE_908_length_249_cov_12577.109091_g895_i0 PRJNA306153 908 249 12577.109091 31317.00163659 Cystofilobasidium capitatum 5412 Fungi Fungi 268 2.06e-67   NTclustered gi|501438057|gb|FJ644524.2| 5412 g895 i0 95.266 111.606425702811 169 8 68 0 1 169 1853 2021 Cystofilobasidium capitatum voucher 01/04 28S ribosomal RNA gene, partial sequence blastn 27790 268 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Cystofilobasidiales Cystofilobasidiaceae Cystofilobasidium Cystofilobasidium capitatum
9990410 9990410 PRJNA306153_S_NODE_968_length_243_cov_6988.285047_g955_i0 PRJNA306153 968 243 6988.285047 16981.53266421 Mycena 41247 Fungi Fungi 305 1.52e-78   NTclustered gi|1859735610|gb|MT644928.1| 41248 g955 i0 99.405 71.1275720164609 168 1 69 0 76 243 4129 3962 Mycena galopus isolate DM1023 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 17284 305 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Mycenaceae Mycena Mycena galopus
10580305 10580305 PRJNA306153_S_NODE_809_length_265_cov_23.343220_g796_i0 PRJNA306153 809 265 23.34322 61.859533 uncultured Malassezia 338567 Fungi Fungi 475 1.2099999999999996e-129   NTclustered gi|398360769|gb|JX132826.1| 338567 g796 i0 99.615 98.3660377358491 260 1 98 0 1 260 282 541 Uncultured Malassezia clone CEas161 26S ribosomal RNA gene, partial sequence blastn 26067 475 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae   uncultured Malassezia
13130169 13130169 PRJNA306153_S_NODE_2031_length_174_cov_6.744828_g2018_i0 PRJNA306153 2031 174 6.744828 11.73600072 Cystofilobasidium capitatum 5412 Fungi Fungi 259 8.04e-65   NTclustered gi|501438057|gb|FJ644524.2| 5412 g2018 i0 94.152 136.241379310345 171 8 97 1 1 169 1767 1597 Cystofilobasidium capitatum voucher 01/04 28S ribosomal RNA gene, partial sequence blastn 23706 259 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Cystofilobasidiales Cystofilobasidiaceae Cystofilobasidium Cystofilobasidium capitatum
13130170 13130170 PRJNA306153_S_NODE_2171_length_169_cov_6.921429_g2158_i0 PRJNA306153 2171 169 6.921429 11.69721501 Leucosporidium scottii 5278 Fungi Fungi 272 9.95e-69   NTclustered gi|1358186634|gb|MH047191.1| 5278 g2158 i0 95.376 107.562130177515 173 4 100 1 1 169 3818 3990 Leucosporidium scottii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 18178 272 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Leucosporidiales Leucosporidiaceae Leucosporidium Leucosporidium scottii
13815600 13815600 PRJNA306153_S_NODE_1871_length_181_cov_2.730263_g1858_i0 PRJNA306153 1871 181 2.730263 4.94177603 Malassezia 55193 Fungi Fungi 329 6.340000000000001e-86   NTclustered gi|1321659621|gb|KY911094.1| 76775 g1858 i0 99.448 69.6408839779006 181 1 100 0 1 181 32595 32775 Malassezia restricta mitochondrion, complete genome blastn 12605 329 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
17639905 17639905 PRJNA306153_S_NODE_294_length_396_cov_4084.389646_g282_i0 PRJNA306153 294 396 4084.389646 16174.18299816 Mycena 41247 Fungi Fungi 527 5.169999999999998e-145   NTclustered gi|1859735620|gb|MT644938.1| 220801 g282 i0 96.262 82.6237373737374 321 12 81 0 1 321 3241 3561 Mycena crocata isolate DM1009 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 32719 527 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Mycenaceae Mycena Mycena crocata
17639909 17639909 PRJNA306153_S_NODE_614_length_298_cov_26.379182_g601_i0 PRJNA306153 614 298 26.379182 78.60996236 Basidiomycota 5204 Fungi Fungi 453 6.500000000000001e-123   NTclustered gi|2120231704|gb|OK605589.1| 264483 g601 i0 94.02 100.973154362416 301 15 100 3 1 298 70 370 Phaffia rhodozyma isolate NRC1 small subunit ribosomal RNA gene, partial sequence blastn 30090 453 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Cystofilobasidiales Mrakiaceae Phaffia Phaffia rhodozyma
20188335 20188335 PRJNA306153_S_NODE_916_length_249_cov_4.450000_g903_i0 PRJNA306153 916 249 4.45 11.0805 Malassezia 55193 Fungi Fungi 442 1.1399999999999995e-119   NTclustered gi|1321659621|gb|KY911094.1| 76775 g903 i0 100 70.8152610441767 239 0 96 0 7 245 2874 3112 Malassezia restricta mitochondrion, complete genome blastn 17633 442 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
21463985 21463985 PRJNA306153_S_NODE_2237_length_167_cov_3.231884_g2224_i0 PRJNA306153 2237 167 3.231884 5.39724628 Malassezia 55193 Fungi Fungi 309 7.53e-80   NTclustered gi|1321659599|gb|KY911093.1| 76775 g2224 i0 100 41.0718562874251 167 0 100 0 1 167 1756 1590 Malassezia restricta mitochondrion, complete genome blastn 6859 309 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
24014124 24014124 PRJNA306153_S_NODE_419_length_347_cov_30.883648_g406_i0 PRJNA306153 419 347 30.883648 107.16625856 Malassezia 55193 Fungi Fungi 571 2.04e-158   NTclustered gi|1546635598|ref|XR_003525370.1| 76775 g406 i0 97.321 90.5389048991354 336 9 97 0 1 336 346 11 Malassezia restricta 28S ribosomal RNA (MRET_r0004), rRNA blastn 31417 571 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
25288363 25288363 PRJNA306153_S_NODE_1120_length_226_cov_366.522843_g1107_i0 PRJNA306153 1120 226 366.522843 828.34162518 Malassezia 55193 Fungi Fungi 307 3.89e-79   NTclustered gi|953821272|gb|KT310070.1| 76773 g1107 i0 98.837 75.7654867256637 172 2 76 0 3 174 667 838 Malassezia globosa isolate 1242 large subunit ribosomal RNA gene, partial sequence blastn 17123 307 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia globosa
25288373 25288373 PRJNA306153_S_NODE_2640_length_154_cov_7.824000_g2627_i0 PRJNA306153 2640 154 7.824 12.04896 Agaricomycetes 155619 Fungi Fungi 261 1.93e-65   NTclustered gi|2576461|gb|AF026607.1|AF026607 68783 g2627 i0 97.386 99.3376623376623 153 4 99 0 2 154 888 736 Scytinostroma alutum 18S ribosomal RNA gene, partial sequence blastn 15298 261 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Russulales Lachnocladiaceae Scytinostroma Scytinostroma alutum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;