RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA299585" and tax_phylum = "Bacteroidota"

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tax_superkingdom 1

tax_phylum 1

  • Bacteroidota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA299585 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15677820 15677820 PRJNA299585_S_NODE_10773_length_200_cov_4.391813_g10543_i0 PRJNA299585 10773 200 4.391813 8.783626 Bacteroides stercoris 46506 Bacteria Bacteria 259 9.54e-65   NTclustered gi|2777733555|dbj|AP031449.1| 46506 g10543 i0 90 474.17 200 20 100 0 1 200 286973 287172 Bacteroides stercoris k33-0107-F9 DNA, complete genome blastn 94834 259 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides stercoris
21463451 21463451 PRJNA299585_S_NODE_10157_length_209_cov_2.616667_g9927_i0 PRJNA299585 10157 209 2.616667 5.46883403 Bacteroides 816 Bacteria Bacteria 339 1.26e-88   NTclustered gi|2093932526|gb|CP082886.1| 291645 g9927 i0 95.735 460.66985645933 211 7 100 2 1 209 1482045 1482255 Bacteroides nordii strain FDAARGOS_1461 chromosome, complete genome blastn 96280 339 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides nordii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;